Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3110 |
Symbol | |
ID | 3625319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3997783 |
End bp | 3998508 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701948 |
Product | hypothetical protein |
Protein accession | YP_306577 |
Protein GI | 73670562 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0481513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.666956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGTT TATCTACAGG GATTGAAGGG TTGGATACGC TAATGAACGG CGGCTTCCCT AAAGGAAAAA GCATTCTGGT TACGGGTCCT CCAGGAGCCG GAAAAACAAT TCTTGGAATT CATTTCCTGC ACAGAAGCTG TAAGGAAGGC AAGAAATGCA TACTGGTTCT TACAAGGGAG CTTACGGAAG ATATCCTCAG CCAGTCCCGA AGCATCCACC TTGACCTCAG GCCTTTTGTT GAGAGTAGAC ATCTAAGTAT CAAGAATATC TTTGAAGACA AAATGAACAA AATCAAAAGC GCTTCGAAAT TTGGTAAAGG GCTCTATGCT GTGGATACTG ATATAATCGA GTATCTCAGT TCCATGTCTT CGGACGTTGA TGTTATGGTT ATCGACAATA TAGGGGTAAT GGCCATAAAC CATGACATAA GAGAATTTGC TGATGAATTC AGTTCGATAA GTATTATACT TCTAAAAAAA GGGTGCACAA GCCTTTTTGT CATGGATGAG GACTCCTATA ACCTTACCCA CAGGCTTACT GGCTACATGG TTTTCGGGCT AATCCGGCTC ACTTCACAGG AGAATTTCAA CTACGGAAAG ACAAAGAAAT ATCTTTACGT TGAGAAAATG CGAGATAAGG CTGTTCCTGT CAAGTATTCT CTGTTTGATA TTACCCCAGA AGGAATCAAA ATTATTACAG GCATGAATGA CCTATTAAAG GCGTGA
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Protein sequence | MESLSTGIEG LDTLMNGGFP KGKSILVTGP PGAGKTILGI HFLHRSCKEG KKCILVLTRE LTEDILSQSR SIHLDLRPFV ESRHLSIKNI FEDKMNKIKS ASKFGKGLYA VDTDIIEYLS SMSSDVDVMV IDNIGVMAIN HDIREFADEF SSISIILLKK GCTSLFVMDE DSYNLTHRLT GYMVFGLIRL TSQENFNYGK TKKYLYVEKM RDKAVPVKYS LFDITPEGIK IITGMNDLLK A
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