Gene Mbar_A3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3107 
Symbol 
ID3625315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3994472 
End bp3994921 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content34% 
IMG OID637701944 
Producthypothetical protein 
Protein accessionYP_306574 
Protein GI73670559 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.563963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.438029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA GACATGCAAA CCATTGTGTC TATAAAATAA GATACCACAT GGTTTTTTGT 
ATGAAATATC GGAAAAAGCT TCTTTTAGAT GCTGAAATCA TTAGTTTTTT GAAAACCATA
TGCTTTGGAA TTGGTGAAAG GTACTGTTTT GAGTTTGATG CAATTGGTAC TGATGGTGAT
CATGTCCATC TTTTTGTTGG TGCCGAACCA AAATATTCTC CTTCAAGAGT AATGCAAATA
ATAAAAAGCA TTACAGCAAG ACAAATTTTT AAGCAATACC CTGAGATCAA AAAACAGCTT
TGGGGTAGTG AACTGTGGAG TGATGGAGGA TACATCGGAA TCGTAGGAGA TGGAACAACT
TCCGATGTAA TAAAAAGCTA TATTGAAAAT CAGGGAAATC AGGAAGAAAA AGAAGCATAC
AAACAAATGA AAATAATCGA TTTTCAATAA
 
Protein sequence
MELRHANHCV YKIRYHMVFC MKYRKKLLLD AEIISFLKTI CFGIGERYCF EFDAIGTDGD 
HVHLFVGAEP KYSPSRVMQI IKSITARQIF KQYPEIKKQL WGSELWSDGG YIGIVGDGTT
SDVIKSYIEN QGNQEEKEAY KQMKIIDFQ