Gene Mbar_A3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3088 
Symbol 
ID3625219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3974545 
End bp3974904 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content38% 
IMG OID637701925 
Producthypothetical protein 
Protein accessionYP_306555 
Protein GI73670540 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0452769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0619114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTC GTGAAATCGA TGACGTTCTA TGGAACTCCA TAGAACCTTA TCTTCCTCCA 
CAGAAACCAC ATACAGGAAG GCCGCGTGCA AATATGAGGA AGTTAATGAA CGGTATTTTT
TACGTTGTTA TGACTGGTTG TACGTGGAAA GACGTTCCCA GGAGATATGG ATCTAAGTCA
ACAGTTCATA GATTTCATCT ATATCTGTGT GAACATGGTA TCTATCCGAA GATTTTCAAT
GAGCTTTTAA ACAAAGGTTA CGACTTGAAG AAAATAGATC TTTCTCATTG CTTTACTGAT
ACAAAGGATA TTCCGGCTAA AAAAGGGGAA ATATCGGCTA CGATGGATAC AAAAAAATAA
 
Protein sequence
MSFREIDDVL WNSIEPYLPP QKPHTGRPRA NMRKLMNGIF YVVMTGCTWK DVPRRYGSKS 
TVHRFHLYLC EHGIYPKIFN ELLNKGYDLK KIDLSHCFTD TKDIPAKKGE ISATMDTKK