Gene Mbar_A3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3085 
Symbol 
ID3625216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3969148 
End bp3971421 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content45% 
IMG OID637701923 
Producthypothetical protein 
Protein accessionYP_306553 
Protein GI73670538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.105752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA AAATTTGTGT AGGTCAAAAT AAAGACGGAA GACTGGAAAT ATTCTACATA 
GGCACGAATG ATAGACTCTA CCACAACTGG CAGAAATCTC CGAATGGTGT TATTTGGAAT
GGCGAAAGGG ACATCAATGA CAAATCCAAC TATCCCACTG CAAAACAAAT CTGTGTAGGT
GAAAATAAAG ACGGAAGACT GGAGATATTC TACATACGCA TGAATGATGA TCGACTCTGC
CACAACTGGC AGAAAGAACC GGGAGGTGAA TGGTCCGGTG AATATGAATC CTACGATGGA
AGCAACTATT ACACTGCAAA ACAAATCTGT GTGTACCAGA ATATAGATGG TAGACTTGAT
ATATTTTACA TAGCCACGAA TGATAGACTT TACTACAACT GGCAGGTATC TCCTAATAGT
GTTTGGAAAG GCCACGCGGA ATTCAAAAAC GGGAGCCACT ATTACACTGC AAAACAAATC
TGTGTGTACC AGAATATAGA TGGTAGACTG GAGATATTCT ACATAGGCAC GAATGATAGA
CTCTACCACA ACTGGCAGAA ATCTCTTGAT GGTGGTTGGC ACGGTGAAGA AGAATTCAAA
CACGGAGGCC ACTATTACAC TGCAAAACAA ATCTGTGTGG GCCGGAATTA CGATGGTAGA
CTGGAGATAT TCTACATAGG CACGAATGAT AGACTCTACC ACAACTGGCA GGAAAAACCG
AATGGTGGTT GGCAAGGTGA AGAAGAATTC AAAGACGGGA GCCACTATTA CACTGCAAAA
CAAATCTGTG TGGGCCAGAA TGCCGATGGT AGACTGGAGA TATTCTACAT AGGCACGAAT
GATAGACTCT ACCACAACTG GCAGGAAAAA CCGAATGGTG GTTGGCACGG TGAAGAAGAA
TTCAAAGACG GAAGCCACTA TTACGCTGCA AAACAAATCT GTGTGGGCCA GAATGTCGAT
GGTAGACTAG AGATATTCTA CATAGCCACG AATGATAGAC TCTACCACAA CTGGCAGGAA
AAACCGAATG GTCATTGGAA TGGCGAAATG CCGTTAGTAG AAGTCTACAC CGTTTGTTTC
TGTGGAACGA GCTGTACCCG AGACGAGGGA GAAGAGACGC GCCCCGCAAG TATTACTTGG
GGCCCAGGAA GTGACAAGCG AATATACTGT GACGAAACGG GTTACATTCC AGTGAGGATT
CACAAGGAAA TATCAGGTAG CCTTAAAGCG ACAAAGCCTA GTGTTACTGT AAGAGGCGTA
TCTGAAAACG ACTGGAGCGA ACCAAGGAAT AAAAGCGAAC CCCTCATCTT TAATAGACCG
CTCAACGCTC ATAAAAGCCT CATCGATTAC GTTAAAAGTT ACAGTGGGGG TGACCAGCGT
AGCCGTCCTG GAATTGCTAC GGGGTGGGCT GCTCCTGCAC TTGCCTTGCA TGGTGCCAAC
CTCGCCGCCG CCAGAGGGGC TCAGCAATAT AATTTTATCG GACACAGCCG TGGTGCCGTC
GAATGTATTA TGGCCGCCTG GTTTCTCTAT GCATACGGCT CCGAAGAGAT CCGTCAAATC
CCCGTTAATA TATTTACAAT TGACCCCGTT CCTGGTCCAG GAAACTGGTA TGGAATATTA
ACCCAACTGC CACCAAATGT GGTCAATTAT GTAGGGGTCT ACGCATGGGA TGTGTGTGGT
GATGAATGTA ATTATGACTC TTCTTTTATG GCATTGGTTC CTAGGCCTAA TGGTCGGATG
ACTGAAAAAG ATAACAACGT AATAATACCG AAGAACTCAG ATTGGAAGTA TATCGCAGAC
AATGCACAAC TAACCGATCC ATTAGCATCC GGCAACTTTT CACAGCCTTT AGGATACAAA
CTTTATGCCT GTCGTGGAAG GCATAGTACC GTTGCGGGAT GTACCACGGC TGATGGCTGG
TACGACTATA ATAAGCGCGA TGGGAGTGTG GCGCCAGTCC CACAGCTTAT TTACAAAATT
GCCAGAGCCT ACCTGACCAA ATGGGGGACG ATCTTCCCTA TCAAGAGTGC GGTTGTAATA
AACGCCTTGG AGCTACGAAA GAAAATTCAT ACAGAGCACT CCAAATTTGA TGCCATGGGT
GGAGGTATTA TCCGAGAGGC AACGCGAGAA ATCTCGTCCA TTAAGGGAAG GGATTCTAGT
TCTAAATATA GAATGGAAGA CGTAGCGGGA CATCCTTCAT CCAGAATGAC TTATCCTGTA
ACTAAGGATT GTAATTATGA AAAAACTGGT TGGGTGAAAT GGAAATTTTT ATAA
 
Protein sequence
MTNKICVGQN KDGRLEIFYI GTNDRLYHNW QKSPNGVIWN GERDINDKSN YPTAKQICVG 
ENKDGRLEIF YIRMNDDRLC HNWQKEPGGE WSGEYESYDG SNYYTAKQIC VYQNIDGRLD
IFYIATNDRL YYNWQVSPNS VWKGHAEFKN GSHYYTAKQI CVYQNIDGRL EIFYIGTNDR
LYHNWQKSLD GGWHGEEEFK HGGHYYTAKQ ICVGRNYDGR LEIFYIGTND RLYHNWQEKP
NGGWQGEEEF KDGSHYYTAK QICVGQNADG RLEIFYIGTN DRLYHNWQEK PNGGWHGEEE
FKDGSHYYAA KQICVGQNVD GRLEIFYIAT NDRLYHNWQE KPNGHWNGEM PLVEVYTVCF
CGTSCTRDEG EETRPASITW GPGSDKRIYC DETGYIPVRI HKEISGSLKA TKPSVTVRGV
SENDWSEPRN KSEPLIFNRP LNAHKSLIDY VKSYSGGDQR SRPGIATGWA APALALHGAN
LAAARGAQQY NFIGHSRGAV ECIMAAWFLY AYGSEEIRQI PVNIFTIDPV PGPGNWYGIL
TQLPPNVVNY VGVYAWDVCG DECNYDSSFM ALVPRPNGRM TEKDNNVIIP KNSDWKYIAD
NAQLTDPLAS GNFSQPLGYK LYACRGRHST VAGCTTADGW YDYNKRDGSV APVPQLIYKI
ARAYLTKWGT IFPIKSAVVI NALELRKKIH TEHSKFDAMG GGIIREATRE ISSIKGRDSS
SKYRMEDVAG HPSSRMTYPV TKDCNYEKTG WVKWKFL