Gene Mbar_A3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3077 
Symbol 
ID3625208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3958693 
End bp3960117 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content46% 
IMG OID637701916 
Producthypothetical protein 
Protein accessionYP_306546 
Protein GI73670531 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.923842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.428423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAC CTGCAAGTAA TAGGTTTTTC ATACTAAAGG AAGGGGGAAT ATATATGGAA 
ACAAAATCAG TTTCAGGGCC TATCGCCGGA ACACGTCTGA CAGAGGAATA CGTCAGGATG
CTTGGACGGC TGGCTTACTT TATGACCTGG CCAATGGTGA ACATGCACAA TCGCCACACC
ATATTTCAGA AAGTTCCAGA GCCTGGCCTG GCTGGTGGGA TTGTGCCTGT AGCACCTTTA
AATCAGTTAA GCATGTTAAC CGATTACATA GACCCGATGG AACGGATTGT CGCCTGCCCG
AATCAGGATG TAGTATATGG TTTTGGCATT ATTTCTCTTG ACCGTGAGCC TGTTATCGTT
CAGGTGCCGG ACTTTGGGGA CAGGTTCTGG GTCTATCAGG CATGTGACCA GCGTACTGAC
GGCTTTACAA GGCTTGGGAA AATGTATGGG ACTGAACCTG GATTCTATAT GCTTGTCGGT
CCGGAATGGA AAGGGGATCT ACCAAAAGGC GTCAAAGATG TCTTTCGGTC ACCTACCAAT
ATTGGTGTTA TTATTCCACG TGTCTTTATG AACGACACCC CCGATGACAG GAAAAAAATC
CAGCCACTAA TCAGTCAGAT CATGGCATAT CCCCTGAGCC AGTTCACAGG AGAGATAAAA
ACAAAAGACT GGTCAAAGAC CCCTGAATTT CCGTCCATAG GAGGAGGCGA GGAAGAGGTA
CAGTGGGTTG TGCCTGAGGC TTTTCCTGAA GTGCTGCCTC AGGTTCTGGA CGAGGTTCCG
CCACTTCCAA GTGAGGAGAC GCTCTACGAA CAAATTCGTG CAGTCCTGAA AGCTGCAGAT
GAGAATACAA CTCTCAAAAA TGTACTCCAG CAGGCCTCCA TCGAGGCAGA CAAAGAGCTT
ATCAAACCAC TTTTCCAGTT CCGGAACTAC GGTATTCCCT GTCCATATAA CTGGACAACT
ATAACAAACG GCGCTGTTTT CGGTACGGAT TATTTTACAC GCACAGCTGT TGCCAAATCA
AATATTTTTG TTAACCAGCC ACTGGAGACA AAGTACTTCT ACCAGGATCT CGATGCTGCG
GGGGAACGGC TGAACGGAGG CCATTATTAC ACGGTTATCT TTTCCAGAGG TATGCTTCCA
CCAGTTAAAG GTTTCTGGTC ACTCACGCTT TATAACGAAT ATCACTTCTT TGCTCCAAAT
ACTCTGAACC GCTACTCTCT GGGCACAAAG AACAGGAATC TACAATATGG CACCGATGGA
TCACTAACTC TTTACGTACA GGCTGAACCT CCAGAAGAGG AAAAACTTCC CAACTGGTTA
CCTGCACCAG AGTCTGATTT CACATTATAT CTCCGAACTT ATTGGCCCAA AATAGATATC
CTTGAGAATA GGTGGACACC ACCCTCGGTA AAGCGGATAA AATAA
 
Protein sequence
MRIPASNRFF ILKEGGIYME TKSVSGPIAG TRLTEEYVRM LGRLAYFMTW PMVNMHNRHT 
IFQKVPEPGL AGGIVPVAPL NQLSMLTDYI DPMERIVACP NQDVVYGFGI ISLDREPVIV
QVPDFGDRFW VYQACDQRTD GFTRLGKMYG TEPGFYMLVG PEWKGDLPKG VKDVFRSPTN
IGVIIPRVFM NDTPDDRKKI QPLISQIMAY PLSQFTGEIK TKDWSKTPEF PSIGGGEEEV
QWVVPEAFPE VLPQVLDEVP PLPSEETLYE QIRAVLKAAD ENTTLKNVLQ QASIEADKEL
IKPLFQFRNY GIPCPYNWTT ITNGAVFGTD YFTRTAVAKS NIFVNQPLET KYFYQDLDAA
GERLNGGHYY TVIFSRGMLP PVKGFWSLTL YNEYHFFAPN TLNRYSLGTK NRNLQYGTDG
SLTLYVQAEP PEEEKLPNWL PAPESDFTLY LRTYWPKIDI LENRWTPPSV KRIK