Gene Mbar_A3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3071 
Symbol 
ID3625082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3951931 
End bp3953031 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content41% 
IMG OID637701911 
Producthypothetical protein 
Protein accessionYP_306541 
Protein GI73670526 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.962312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.378174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGAAA TTGAACAGAT GCTGCCGCTT GGCAGAATTC TCCTGAGGCT GGCTTTTATT 
CTGGTACTGA CAATAGGAGC CATAATAGTA AGTCGATTAT TTCTGAAGCG CTTGCTCTGG
CCGGCAATCA AAAAGACAAA AACAACAGTT GATGACAGAA TACTCCGCCT TTTAGAAAAT
CTCTTGTTAC TTTATATTAT TTTGCAGGGA ATGCAGGCGA TAGTAAGGCT GTTCAGTGAG
CCTGTAGGTA TCTATTCAAA ATTAGTGGAT GATCTCTTTT TCCTTCTCTA CTGGAGTATA
GGAGTCTATA TAATTATTCG CCTCATATCT ATCACTTCAA ACTGGTACTT ATCCAGGGTA
CCATTGCGGG ATCGGGAAAA AATCGACCAG CGAGTTGTTC GCTCCATACA ATACATATTT
CTGCTGGTTT TCAGTTTTCT AGCTATAGTT ATACTCCTGA AACATTTCGG AATCACGGGA
ACTGCACTTA CCGCATCACT TACAGCTCTC GGTCTCAGTG GAATAATCAT TGGACTTGCA
GCCCAGACAA CTCTTGCTGA TATCATTACC GGAATTGTGC TTTTAATTGA CCGCCCCTTC
AGAATCGGAG ACCGTATTCG AATCGAAAAA CTCGATACGT GGGGAGATGT GGTAGAGATC
GGGTGGAGGT CAACGCGTAT TCTTACAAGA GACAATAGGC TTGTAATAAT CCCCAATTCT
GTAATCGGAA TGGATTTGAT CACTAATTAT TCCATACCCG ATAAGATATA CCGTGTAGAG
ACCGATGTAG TTGTATCCTA CGGTCCGGAT ATAGAGCACG TACGGGATCT GATTATTGAA
GCTATGAAGC AAGAAGACTG GATCATGCAT GAAAATCCTA TACAGGTCCT TTTACTCGAG
TTCACAGGGT CAGGGATGAA GCTCAAAGCC AGATGCTGGA TAGAGGATTA TGTAGAGACA
AGGGTTTCAG AAGACCGACT GAATACGGCA ATTTATAAAG CTTTGATAAA TGCAAATATA
GCAATGCCTT CTTCTGATAT CATTATTCAT TTTGCTGACC AGGGAAATGT GTTAACAATT
TCCAAAAAAG ACAAGAATTA A
 
Protein sequence
MVEIEQMLPL GRILLRLAFI LVLTIGAIIV SRLFLKRLLW PAIKKTKTTV DDRILRLLEN 
LLLLYIILQG MQAIVRLFSE PVGIYSKLVD DLFFLLYWSI GVYIIIRLIS ITSNWYLSRV
PLRDREKIDQ RVVRSIQYIF LLVFSFLAIV ILLKHFGITG TALTASLTAL GLSGIIIGLA
AQTTLADIIT GIVLLIDRPF RIGDRIRIEK LDTWGDVVEI GWRSTRILTR DNRLVIIPNS
VIGMDLITNY SIPDKIYRVE TDVVVSYGPD IEHVRDLIIE AMKQEDWIMH ENPIQVLLLE
FTGSGMKLKA RCWIEDYVET RVSEDRLNTA IYKALINANI AMPSSDIIIH FADQGNVLTI
SKKDKN