Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3065 |
Symbol | |
ID | 3625076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3942757 |
End bp | 3943785 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701905 |
Product | hypothetical protein |
Protein accession | YP_306535 |
Protein GI | 73670520 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.499692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.243207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGG AGAATCAGTC GATACCAGCC AGGATTTTAC TTTACAGTAC AGCTGCGGTT ATCCTGACAA TTGGAATGCG GGAGATTGCT CCAATACTTA CAGTCTTCTT TTTCTCTGTA TTTATCGCAC TGATCTTTAC TCCGCTTGTC CGATGGCTTA AGAAAAAAGG AATTCCCGGG GGACTGAGTG TCTTTCTGGC AATTCTGTTA TTTGCCTTCA TAGTCCTGAT TCTTGGAGTA ATAGTTGCCA GCGCAGCAAT CCAGTTTGGA AGCCAGATCC CGCAATATCA AGATCAGTTA ACTGACTTTA TGAGTAATCT TGCAAAATAT ATCCCTTCAT ATGACGGTTT TTCCGTGCAG TCAATCATTC GTGGCATCGT GTCAATTACG GTTTCCTTTG TGGTAAACAT CTTTAATGGG CTTGTAAATA CCGGGACAAC AGCTGGAATT ATCATACTCA CGACGGCCTT TATGTTAATA GAGGCTACAA ATGTTCCTGA AAAAATAAAT GAGAAAATTG AAAAGCAATC TGAACTCCAA TTGAGGTTAA GTATCTTTAG CAGGAAGTTA GTAAAATTTA TTGTTATAAG AGCTGAAATA AATCTTATCA CAGCCGTTGC AATTACTATT ACTTTCCTTA TCAGCGGGAT CGACTATGCG ATTCTCTGGG GAGTTCTTAT ATTCATTCTG AGTTACATCC CCTATATTGG TCTTGTTATA GCTTCCATTC CTCCCATAGT GATTGCGCTT TTTAAGTATG GGCCTTTAGG TGCTCTTGCA GTTATTGTCG TTATCGCTGC TGTTGACGGA ATCACAGAAA ATGTCCTTTT CCCTTCACTT ATGGGAAAAG GCCTGCAGTT ATCTCCAGCC TTTTTATTTC TTGCTCTTAT CTACTGGAAT TTTGTACTCG GAGGCGCAGG TGCATTACTT TCCATACCTC TTACAATGGC TTTGAAAATC ATGTTTGAGA GTTTTGATGA AACAAAATGG ATGGCCAGAT TAATGGGCCC ACCAGGAGAG ATAGAGTAA
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Protein sequence | MDMENQSIPA RILLYSTAAV ILTIGMREIA PILTVFFFSV FIALIFTPLV RWLKKKGIPG GLSVFLAILL FAFIVLILGV IVASAAIQFG SQIPQYQDQL TDFMSNLAKY IPSYDGFSVQ SIIRGIVSIT VSFVVNIFNG LVNTGTTAGI IILTTAFMLI EATNVPEKIN EKIEKQSELQ LRLSIFSRKL VKFIVIRAEI NLITAVAITI TFLISGIDYA ILWGVLIFIL SYIPYIGLVI ASIPPIVIAL FKYGPLGALA VIVVIAAVDG ITENVLFPSL MGKGLQLSPA FLFLALIYWN FVLGGAGALL SIPLTMALKI MFESFDETKW MARLMGPPGE IE
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