Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3062 |
Symbol | |
ID | 3625073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3939875 |
End bp | 3941050 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701902 |
Product | hypothetical protein |
Protein accession | YP_306532 |
Protein GI | 73670517 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.386129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTGCA AAAAACTGAC CTCAAGCCCT CCAGAATGGG ATCCACCTGC ACCTTCAACA GTCTATATCA AAATTAAAAA CATTCCGTAC GAAACGTTCA AAGCACGGCT GAACGAGGGG CTAGTTACAA CTGAGCTTGA CCAGATTCGA TACCGGCTGG AAAAAAGAAT CTACTGCTGT GGGGTCTGTT CCAAGCATGT TAATGGATAC TGCATTATTA CAAACCGGAA AGTTGAGCCA GAACGGATTT GTAAGGCTTT TGTGCCAAAA GAAGAATTCA TATATCTCGA TTCAAGGCCT GGCTCGGAAA CATCCCCGGA TTTCAGATAC CTTTCAGAAA CCGGACTTAG GAAAAACTAT CTTGAAGGCG AGGACCCGGA AAAAAGTAAC CTGAAAAGTA CAGAGAGCCT CTATGAGGAA GGAGTGATTC TTTACAGGCA GGGCAGGCTC AGGCTTGCAC TTGAAGCTTT CGATATGGTA CTTTTAGAAA ACCCCAGGCA TTTTCCAGCC CTGTTTCATA GAGGAAACAC CCTGCTAAAA CTCAAACGCT ATGAAGAGGC TCTTGAAACG TTTGAAAGTG CCTCCAGGAT AAACCCGAAT CATCCAGGGC TCTGGACCAA TTCCGGGTTT GCACTGGTAA AGCTCGAGCA TCTCAGGCAG GCACTTGAAG CTTTCGAGAA GTCTATATCC CTAAACCCGG TACAGAAAAA TGCCTGGGAG GGGAAGGAAG CTGTGCTTGT TCGGGTGCGT AAGTGTGAAG AGAAACTGAA GGAATTTGAA AAATCCCTGA AAAGAAATCC TGAGGATGCA GATATCTGGT TTGAGAAAGG CAAACTGTAC TTAAAGCTCG GAGAACTTGA AAAATCCAGA GAAGCTTTTG AAAAAGCCCT TGAGGAAAAA TCCGAGAATG CAGAGGCCTG GCATCTCAGA GGAAAAATAC TTTTTGAAAC CGGCTCTGAA AAAGAAGCCC TGCATGCTTT TGAAATGGCA CTCAGGAAGA AACCTAACTT TCCTGAAGCC TGGTATGAAA AAGGAAGGGT TTTACTGAGT CTTGGTAACC CTAAAGGAGC AGAAAACGCT TTTAAAATAG CAGCTGACCT GTCAGAAAGT AAGGGAGCTA AAGCAAAAGC TGAAACTGCT CGTGCAAGAG TTAAAAGGTC TGGATCTGTT AAATAG
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Protein sequence | MTCKKLTSSP PEWDPPAPST VYIKIKNIPY ETFKARLNEG LVTTELDQIR YRLEKRIYCC GVCSKHVNGY CIITNRKVEP ERICKAFVPK EEFIYLDSRP GSETSPDFRY LSETGLRKNY LEGEDPEKSN LKSTESLYEE GVILYRQGRL RLALEAFDMV LLENPRHFPA LFHRGNTLLK LKRYEEALET FESASRINPN HPGLWTNSGF ALVKLEHLRQ ALEAFEKSIS LNPVQKNAWE GKEAVLVRVR KCEEKLKEFE KSLKRNPEDA DIWFEKGKLY LKLGELEKSR EAFEKALEEK SENAEAWHLR GKILFETGSE KEALHAFEMA LRKKPNFPEA WYEKGRVLLS LGNPKGAENA FKIAADLSES KGAKAKAETA RARVKRSGSV K
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