Gene Mbar_A3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3062 
Symbol 
ID3625073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3939875 
End bp3941050 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content44% 
IMG OID637701902 
Producthypothetical protein 
Protein accessionYP_306532 
Protein GI73670517 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.386129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTGCA AAAAACTGAC CTCAAGCCCT CCAGAATGGG ATCCACCTGC ACCTTCAACA 
GTCTATATCA AAATTAAAAA CATTCCGTAC GAAACGTTCA AAGCACGGCT GAACGAGGGG
CTAGTTACAA CTGAGCTTGA CCAGATTCGA TACCGGCTGG AAAAAAGAAT CTACTGCTGT
GGGGTCTGTT CCAAGCATGT TAATGGATAC TGCATTATTA CAAACCGGAA AGTTGAGCCA
GAACGGATTT GTAAGGCTTT TGTGCCAAAA GAAGAATTCA TATATCTCGA TTCAAGGCCT
GGCTCGGAAA CATCCCCGGA TTTCAGATAC CTTTCAGAAA CCGGACTTAG GAAAAACTAT
CTTGAAGGCG AGGACCCGGA AAAAAGTAAC CTGAAAAGTA CAGAGAGCCT CTATGAGGAA
GGAGTGATTC TTTACAGGCA GGGCAGGCTC AGGCTTGCAC TTGAAGCTTT CGATATGGTA
CTTTTAGAAA ACCCCAGGCA TTTTCCAGCC CTGTTTCATA GAGGAAACAC CCTGCTAAAA
CTCAAACGCT ATGAAGAGGC TCTTGAAACG TTTGAAAGTG CCTCCAGGAT AAACCCGAAT
CATCCAGGGC TCTGGACCAA TTCCGGGTTT GCACTGGTAA AGCTCGAGCA TCTCAGGCAG
GCACTTGAAG CTTTCGAGAA GTCTATATCC CTAAACCCGG TACAGAAAAA TGCCTGGGAG
GGGAAGGAAG CTGTGCTTGT TCGGGTGCGT AAGTGTGAAG AGAAACTGAA GGAATTTGAA
AAATCCCTGA AAAGAAATCC TGAGGATGCA GATATCTGGT TTGAGAAAGG CAAACTGTAC
TTAAAGCTCG GAGAACTTGA AAAATCCAGA GAAGCTTTTG AAAAAGCCCT TGAGGAAAAA
TCCGAGAATG CAGAGGCCTG GCATCTCAGA GGAAAAATAC TTTTTGAAAC CGGCTCTGAA
AAAGAAGCCC TGCATGCTTT TGAAATGGCA CTCAGGAAGA AACCTAACTT TCCTGAAGCC
TGGTATGAAA AAGGAAGGGT TTTACTGAGT CTTGGTAACC CTAAAGGAGC AGAAAACGCT
TTTAAAATAG CAGCTGACCT GTCAGAAAGT AAGGGAGCTA AAGCAAAAGC TGAAACTGCT
CGTGCAAGAG TTAAAAGGTC TGGATCTGTT AAATAG
 
Protein sequence
MTCKKLTSSP PEWDPPAPST VYIKIKNIPY ETFKARLNEG LVTTELDQIR YRLEKRIYCC 
GVCSKHVNGY CIITNRKVEP ERICKAFVPK EEFIYLDSRP GSETSPDFRY LSETGLRKNY
LEGEDPEKSN LKSTESLYEE GVILYRQGRL RLALEAFDMV LLENPRHFPA LFHRGNTLLK
LKRYEEALET FESASRINPN HPGLWTNSGF ALVKLEHLRQ ALEAFEKSIS LNPVQKNAWE
GKEAVLVRVR KCEEKLKEFE KSLKRNPEDA DIWFEKGKLY LKLGELEKSR EAFEKALEEK
SENAEAWHLR GKILFETGSE KEALHAFEMA LRKKPNFPEA WYEKGRVLLS LGNPKGAENA
FKIAADLSES KGAKAKAETA RARVKRSGSV K