| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3049 |
|---|
| Symbol | |
|---|
| ID | 3624846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3927537 |
|---|
| End bp | 3928649 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637701890 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_306520 |
|---|
| Protein GI | 73670505 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00782519 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.671104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG CGTTCAAATT TAGACTCTAT CCTACAACTA CGCAGGCTGT TCAATTAAAT
CAGCATATAG GTAGCTGTAG ATTTGTCTAC AATTGGGCAC TTGATCAGAA AATTAAAACT
TATGAACAGA CAGGAAAATC AATTTCCAGA TTTGACTTAA ACAAAAAGCT TCCTGTCTTG
AAAGCTTCTA ATGAATGGTT AGGAGAAGTC AATTCTCAAT CATTGCAGAG AATGACTAAG
CAGGTTGAGT CTGCCTTCAC TCGATTTTTC CGAGAGAAGA ACGGCTTTCC TAAGTTCAAA
TCTAAGAAAA ACCCAATTCA ATCTTTTCCT GTACCTCAAC ACTACTCCGT AGACTTTGAA
AAAAACACTA TCAAGCTCCC TAAAATAGAA CCAATTAAAG CAGTTTTTCA CAGGAAGTTT
GAGGGCGAGC TTAAAACAGC TACTGTTTCA AGGACATGTC AAGGACATTA CTACATTAGT
ATCCTTGTTG AAGATGGAAA AGAACTTCCT ACAAAACAGA AGTATTCAGA ATCTACTACA
GTGGGTATAG ATGTCGGGAT TAAGGATTTT GCTATACTTT CCACAGGAGA AACGATTGAG
AATCCTAACT ACCTGAAAAA CTCTTTGAAC AGGTTAAAGG TTCTTCAAAA AAGAGCATCA
AGGAAACTGA AAGGTTCTAA GAACAGGGTA AAAGCCAAAC ATAGGCTTGC TGTACTACAT
GACAAAATAA CTAATCAGAG GAACGACTTC CAGAACAAAC TCTCTTTTAA ACTCATAAGC
GAAAACCAAG CAATAGCTCT GGAAACTCTG AATGTTAAAG GAATGGTCAA GAATCATCAT
TTGGCACAGG CTATAAGTGA TTCCGCATGG AGCAGTTTTG TAACAAAACT AGAGTATAAA
GCTGAATGGT ACGGAAAAAC CATCCTGAGA ATTGGGCAAT TTGAACCATC TTCTAAAGTA
TGTCATGTTT GTGGATATCA TAATTCATAT TTGACATTAA AAGATAGAGA ATGGACTTGC
CCAGACTGTA AAACAAAACA TGATAGAGAT ATAAATGCCG CTATCAATAT CAAGAAATTT
GCTCTCATAG ATCAAAATCT AATTGGATTA TAA
|
|---|
| Protein sequence | MMKAFKFRLY PTTTQAVQLN QHIGSCRFVY NWALDQKIKT YEQTGKSISR FDLNKKLPVL
KASNEWLGEV NSQSLQRMTK QVESAFTRFF REKNGFPKFK SKKNPIQSFP VPQHYSVDFE
KNTIKLPKIE PIKAVFHRKF EGELKTATVS RTCQGHYYIS ILVEDGKELP TKQKYSESTT
VGIDVGIKDF AILSTGETIE NPNYLKNSLN RLKVLQKRAS RKLKGSKNRV KAKHRLAVLH
DKITNQRNDF QNKLSFKLIS ENQAIALETL NVKGMVKNHH LAQAISDSAW SSFVTKLEYK
AEWYGKTILR IGQFEPSSKV CHVCGYHNSY LTLKDREWTC PDCKTKHDRD INAAINIKKF
ALIDQNLIGL
|
|---|
| |