Gene Mbar_A3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3046 
Symbol 
ID3624843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3925674 
End bp3926069 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content44% 
IMG OID637701887 
ProductJAMM-like protein. metallo peptidase. MEROPS family M67B 
Protein accessionYP_306517 
Protein GI73670502 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.208196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.597749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTA AAGGAATAGC CCGTGATACT CTTAATTTTA TCCTGGAGGC AAGCAAGTCC 
ATGGCTCCTC AGGAATTTGC CGGACTTTTG CAGGAAAAAG ATGGCATCAT CACTGAAGTT
CTTATATTAC CTGGCACGGA ATCAAGTGAT TCAAATGCCG TTCTCAGACT TTATATGATG
CCGAACATTA AAGCCGCAGG TTCAGTCCAC AGCCATCCGG GCCCGAACCG CAGTCCTTCA
CAGGCTGACC TACTCCTCTT TTCGAAAACA GGCAACTGCC ATATCATAGT TGGCCGCCCT
TATAGTAGTC AAAGCTGGAC ATGCTATAAT AGGGAAGGAA AAGTAATCGA TCTTCCAGTG
CTTGATGTTG AATTTGAGGA TTACGAAGAG ATTTGA
 
Protein sequence
MQIKGIARDT LNFILEASKS MAPQEFAGLL QEKDGIITEV LILPGTESSD SNAVLRLYMM 
PNIKAAGSVH SHPGPNRSPS QADLLLFSKT GNCHIIVGRP YSSQSWTCYN REGKVIDLPV
LDVEFEDYEE I