Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3038 |
Symbol | |
ID | 3624835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3915974 |
End bp | 3916417 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637701880 |
Product | hypothetical protein |
Protein accession | YP_306510 |
Protein GI | 73670495 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000975242 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.515565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGTT CAAAGTTATT CGAAAAAATA TTGATAGCAA CTGATGGATC TGAAAAAAAT AAGTCTGCGG TTGAAGAGGC AGTAAAAATT GCCCGTGCAT GTGGGTCCAC AGTCTATGCA GTCTATGTAA TGGACGAGAG CCTGATGAAA TCTGCTATTG AAGTTCCAAT TGCAGAAGAT CTTTACAGAA GAATCAGAGA AGAAGGAGAA GAAGCAGTCA ACGGGGTAAA GGAAATTGCG CAGGGTGTGA ATCTGGAGAC CTTCATACTA TCTGGCAGGC CAGCTCGTGC AATCACTGAA TTTGCAGAAC AAAAAGAAGT TGATCTAATT GTTGTCGGAA CACAGGGGAA AAGTGGCATT GAGAGATTTT TATTAGGCAG CGTTGCCGAC GAGGTTATAA GGACCGCTGG TTGCCCGGTG TTGACGATAA AAAGTAGAAA ATAA
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Protein sequence | MISSKLFEKI LIATDGSEKN KSAVEEAVKI ARACGSTVYA VYVMDESLMK SAIEVPIAED LYRRIREEGE EAVNGVKEIA QGVNLETFIL SGRPARAITE FAEQKEVDLI VVGTQGKSGI ERFLLGSVAD EVIRTAGCPV LTIKSRK
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