Gene Mbar_A3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3035 
Symbol 
ID3624832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3905841 
End bp3906890 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content39% 
IMG OID637701877 
Producthypothetical protein 
Protein accessionYP_306507 
Protein GI73670492 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.124885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGGATG AAATTATAAA TTCAAATGAT TATTCAGTAC CCGCTAAAAT TTTACTTTAC 
AGCACCGCTG CCGTTATTTT GACAATAGGG ATGCGGGAAA TTGCATCAAT ACTTACAGTC
GTCTTTTTCT CTGTGTTTAC CGCGTTGATC TTTACTCCGC TTGTCCGCTG GTTAAAACAG
AGAGGGATTC CAGGTGTACT GAGTGTTATT CTGGTAATCT TACTATTTAC TCTAATTATC
CTGGTTCTTG GAATAATAGT TGTTGAAGCA GCATTGCAGT TTGGAAGTCA GATTCCGATT
TATCAAGCTC AGTTGACCGA ACTCGTGAAC AATCTTGCAA AATATGTCCC TTCATATGAA
GAATTTTCCA TACAGTCGAT TCTCCGTAGT ATGGTGTCGA TAACAATTTC TCTCATGGCA
AATACCGTTA ATGGAATTGT GAATGCTGGG GCAACAGTCG GAATTATTAT TGTTACAGCA
GCATTTTTGC TAATTGATGC CGCCAATAAT CCTGAAAAAG TAGACTCGGA AATTGGAAAG
CAGTCCGAAC TCCGCTTGAG GATGAGTAAA TTTAGCAAGA AGCTGGTAAA ATTCATAGTC
ATAAGAGCAG AAATAAACCT TATAACTGCT ATTACAATTG CTCTCCTTCT CTTTATCGGA
GGCATCGACT ATGCTATTCT CTGGGGAGTC CTCATATTTC TATTAAGTTA TATTCCCTAT
ATTGGTCTGG TTATTGCTTC TGTTCCTCCT ATAATGCTTG CGCTTTTCAA GTATGGGCCT
TTAGGAGCTA TCGCAGTCAT TTTAATTATT GTCATTGTGG ACGCGCTTGC AGAAAATGTT
CTTTTCCCAT CCCTTATGGG AAAAGGCTTG CAATTATCCC CTGCTTTCCT GTTTCTTGCT
CTTCTTTACT GGAATTTTGT GTTTGGACTC GGAGGTGTGC TGCTTTCAAT ACCGCTTACA
ATAGTTTTGA AGATTATACT TGAAAGCTTT GAGGAAACAA AATGGCTAGC CAGATTGATG
GGTCCGGTTG AAGAAACTGA AGAAAGTTAA
 
Protein sequence
MGDEIINSND YSVPAKILLY STAAVILTIG MREIASILTV VFFSVFTALI FTPLVRWLKQ 
RGIPGVLSVI LVILLFTLII LVLGIIVVEA ALQFGSQIPI YQAQLTELVN NLAKYVPSYE
EFSIQSILRS MVSITISLMA NTVNGIVNAG ATVGIIIVTA AFLLIDAANN PEKVDSEIGK
QSELRLRMSK FSKKLVKFIV IRAEINLITA ITIALLLFIG GIDYAILWGV LIFLLSYIPY
IGLVIASVPP IMLALFKYGP LGAIAVILII VIVDALAENV LFPSLMGKGL QLSPAFLFLA
LLYWNFVFGL GGVLLSIPLT IVLKIILESF EETKWLARLM GPVEETEES