Gene Mbar_A3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3015 
Symbol 
ID3624662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3880484 
End bp3881272 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content48% 
IMG OID637701859 
Producthypothetical protein 
Protein accessionYP_306489 
Protein GI73670474 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.667221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0266748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGCC TTGAAGAACT GGGAAAAAAG CTTACTGAAG CTGGCAGGTT GAAATTACGT 
CCATTATGTG TTTACGGTAC GGATGAAATC CCTGAGGGCG CAATCCCATC ATACAAAGTA
GACCGCTGTA TAGCAAAGGC GATTTACACT TCAGTTCTCT TTGAAGAGAC GCCTCCACTA
TATGTTGAGG CAGGACACGA ACAGTGTTGC GCCGGTGGGA TGGCCTGGAT GGGACTTGCC
GAGCCGCATC CAAAACTTAA GTACTTCGTA ACTGTGGGCA CCCCAGACTT CCATGGAGGC
GCTGCCGAGC ATTTAAAGGC AACCCCTGAG CTATTCGATG AACAGAGAGA ACGAGCAGGA
AAAATCCTTC CGCATGGTAG ATACACAGTC ATTGCTCCGT GTACTCACAA CCTGGCACCT
GAAATTGTCA GGTCTTTTAT TGTCTTTGCA GGCAGCGAGC AGATCAGGAA CCTCTGCGGG
CTGGCACAGT TCAGTAGCTC TGAGCCCTTT TTTAAAACCG TGATACCCGG AGGACCTATT
TGCGCTACAA TGATCGCTTT CCCGGCAGGC ATGGCAGAAA ATGCACCGAA AGATTCGGCT
TATATCGGGC CTGTAGATCC TACAGGAAAC CCCTGGCTGC CTCCCGAATT AATGATAATG
GGTATTCCTT TTGGACTGGC GAAACAGATG ACAACCGACC TTGAGGAATC CTTTATCTGC
AAACGGAGCA AAATCGCATA TCCTGAAAAT CGTATAGTTA TAAAACCGTA TAGCTATAAA
ACCGTATAG
 
Protein sequence
MLSLEELGKK LTEAGRLKLR PLCVYGTDEI PEGAIPSYKV DRCIAKAIYT SVLFEETPPL 
YVEAGHEQCC AGGMAWMGLA EPHPKLKYFV TVGTPDFHGG AAEHLKATPE LFDEQRERAG
KILPHGRYTV IAPCTHNLAP EIVRSFIVFA GSEQIRNLCG LAQFSSSEPF FKTVIPGGPI
CATMIAFPAG MAENAPKDSA YIGPVDPTGN PWLPPELMIM GIPFGLAKQM TTDLEESFIC
KRSKIAYPEN RIVIKPYSYK TV