Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3015 |
Symbol | |
ID | 3624662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3880484 |
End bp | 3881272 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637701859 |
Product | hypothetical protein |
Protein accession | YP_306489 |
Protein GI | 73670474 |
COG category | [S] Function unknown |
COG ID | [COG2043] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.667221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0266748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAGCC TTGAAGAACT GGGAAAAAAG CTTACTGAAG CTGGCAGGTT GAAATTACGT CCATTATGTG TTTACGGTAC GGATGAAATC CCTGAGGGCG CAATCCCATC ATACAAAGTA GACCGCTGTA TAGCAAAGGC GATTTACACT TCAGTTCTCT TTGAAGAGAC GCCTCCACTA TATGTTGAGG CAGGACACGA ACAGTGTTGC GCCGGTGGGA TGGCCTGGAT GGGACTTGCC GAGCCGCATC CAAAACTTAA GTACTTCGTA ACTGTGGGCA CCCCAGACTT CCATGGAGGC GCTGCCGAGC ATTTAAAGGC AACCCCTGAG CTATTCGATG AACAGAGAGA ACGAGCAGGA AAAATCCTTC CGCATGGTAG ATACACAGTC ATTGCTCCGT GTACTCACAA CCTGGCACCT GAAATTGTCA GGTCTTTTAT TGTCTTTGCA GGCAGCGAGC AGATCAGGAA CCTCTGCGGG CTGGCACAGT TCAGTAGCTC TGAGCCCTTT TTTAAAACCG TGATACCCGG AGGACCTATT TGCGCTACAA TGATCGCTTT CCCGGCAGGC ATGGCAGAAA ATGCACCGAA AGATTCGGCT TATATCGGGC CTGTAGATCC TACAGGAAAC CCCTGGCTGC CTCCCGAATT AATGATAATG GGTATTCCTT TTGGACTGGC GAAACAGATG ACAACCGACC TTGAGGAATC CTTTATCTGC AAACGGAGCA AAATCGCATA TCCTGAAAAT CGTATAGTTA TAAAACCGTA TAGCTATAAA ACCGTATAG
|
Protein sequence | MLSLEELGKK LTEAGRLKLR PLCVYGTDEI PEGAIPSYKV DRCIAKAIYT SVLFEETPPL YVEAGHEQCC AGGMAWMGLA EPHPKLKYFV TVGTPDFHGG AAEHLKATPE LFDEQRERAG KILPHGRYTV IAPCTHNLAP EIVRSFIVFA GSEQIRNLCG LAQFSSSEPF FKTVIPGGPI CATMIAFPAG MAENAPKDSA YIGPVDPTGN PWLPPELMIM GIPFGLAKQM TTDLEESFIC KRSKIAYPEN RIVIKPYSYK TV
|
| |