Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3008 |
Symbol | |
ID | 3626670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3871445 |
End bp | 3872116 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637701852 |
Product | hypothetical protein |
Protein accession | YP_306482 |
Protein GI | 73670467 |
COG category | [R] General function prediction only |
COG ID | [COG0727] Predicted Fe-S-cluster oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00932756 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0017444 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTATATA CGAAAATACC AATGCAAGCG TATGAAAACT TTCACAAGAT ATTCAGTGGA AGTAATCAAA ATACTTTTGA AATCTGCAGT GAATGTGGTG GAGCGTGCGA GCATAATAAA ATAGGAACTC TGTTGCCTGG GGAAGAAGAG TATATGGCAG AAAAAATGGG TATAAACGTT TCGGAATTTA AAATTCGCTA CCTTGATGCT GTGGAAATGG ATGACGGAAC TTTAATATAT GTATTAAAAT TAGGAAAGTT GTGCCCCTTT TTATGTGAAG AAAATGAAGA ATGTAAGTGC AGGGATTTTA AGCCTATATT CTGTAAAATC TATCCTTTAG TCCTCACGCT TGAAGATAAT AAAATAAATT TTACAATGGA TAACTGGTGT AAACTGTCAA GAAAAAAAGC TTGCAGGCTT TATTTTGAAA CTGCCATCCC GCTTTTGTCA AGCCTTGAAA TTCCAATAGA ATGGTTAAGG CATGTAACTA GCTATGATAA TCTCTGCTTT GATTACGATC AATTAAAAGA ATACAGGCGC GGAAAAAATA AGTATGCAAC TTTTTTGCTG GAAGAATTGC TGAGTTTGCA GAAAGCCGAA ATCGAAACTA TCAGTCTATG TGCTGATTTC AGTCAGGATT TAGGCCAGAA AGTTGAAGAA CCTGTTTTTT AA
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Protein sequence | MLYTKIPMQA YENFHKIFSG SNQNTFEICS ECGGACEHNK IGTLLPGEEE YMAEKMGINV SEFKIRYLDA VEMDDGTLIY VLKLGKLCPF LCEENEECKC RDFKPIFCKI YPLVLTLEDN KINFTMDNWC KLSRKKACRL YFETAIPLLS SLEIPIEWLR HVTSYDNLCF DYDQLKEYRR GKNKYATFLL EELLSLQKAE IETISLCADF SQDLGQKVEE PVF
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