Gene Mbar_A3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3008 
Symbol 
ID3626670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3871445 
End bp3872116 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content35% 
IMG OID637701852 
Producthypothetical protein 
Protein accessionYP_306482 
Protein GI73670467 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00932756 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0017444 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTATATA CGAAAATACC AATGCAAGCG TATGAAAACT TTCACAAGAT ATTCAGTGGA 
AGTAATCAAA ATACTTTTGA AATCTGCAGT GAATGTGGTG GAGCGTGCGA GCATAATAAA
ATAGGAACTC TGTTGCCTGG GGAAGAAGAG TATATGGCAG AAAAAATGGG TATAAACGTT
TCGGAATTTA AAATTCGCTA CCTTGATGCT GTGGAAATGG ATGACGGAAC TTTAATATAT
GTATTAAAAT TAGGAAAGTT GTGCCCCTTT TTATGTGAAG AAAATGAAGA ATGTAAGTGC
AGGGATTTTA AGCCTATATT CTGTAAAATC TATCCTTTAG TCCTCACGCT TGAAGATAAT
AAAATAAATT TTACAATGGA TAACTGGTGT AAACTGTCAA GAAAAAAAGC TTGCAGGCTT
TATTTTGAAA CTGCCATCCC GCTTTTGTCA AGCCTTGAAA TTCCAATAGA ATGGTTAAGG
CATGTAACTA GCTATGATAA TCTCTGCTTT GATTACGATC AATTAAAAGA ATACAGGCGC
GGAAAAAATA AGTATGCAAC TTTTTTGCTG GAAGAATTGC TGAGTTTGCA GAAAGCCGAA
ATCGAAACTA TCAGTCTATG TGCTGATTTC AGTCAGGATT TAGGCCAGAA AGTTGAAGAA
CCTGTTTTTT AA
 
Protein sequence
MLYTKIPMQA YENFHKIFSG SNQNTFEICS ECGGACEHNK IGTLLPGEEE YMAEKMGINV 
SEFKIRYLDA VEMDDGTLIY VLKLGKLCPF LCEENEECKC RDFKPIFCKI YPLVLTLEDN
KINFTMDNWC KLSRKKACRL YFETAIPLLS SLEIPIEWLR HVTSYDNLCF DYDQLKEYRR
GKNKYATFLL EELLSLQKAE IETISLCADF SQDLGQKVEE PVF