| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3006 |
|---|
| Symbol | |
|---|
| ID | 3626668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3868056 |
|---|
| End bp | 3868910 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637701850 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306480 |
|---|
| Protein GI | 73670465 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0891614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00390833 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTAC TGAGCATTGT TGCTTGCGGG ATGCTCGAAG ACGAGCTTGT ACATGTATTA
TCAAAAGACC GTGATTTACA GCAGCTAATC GTTGTGGAAA ACCGGGAGAG CTCAGGTTTC
CTCCGTAAGC TCAGACTGAG AAATTGCAAC CCAAGGACAG CTTTTTTGGA TCGAGTCCCA
ATGCTCCTGA AAGGCCGCTC TAACCCTGGT TTCATAGTTC CTTCAAGGTT TCTTTCAAGC
CTTCCGATCC TCAAAAAGTT TTGTAAGAGG AGGAAACTCC GGAAAGATAT AAGCGTTGTT
GTAAATCTAT TAAGTTTGAG CCTGCATACC GACCTTGAGA TTTTAAAGGC TGAAGTTTAC
AGAAATATCT ATGAGATGGC GTCCTTTTCG GACAGAATCC TGGTTTTTTA TGGAGTCTGC
GGGCACGCAC TTGGAAAACT GGAAGAGGAT TTATCGGATC TGGAATGCCC ACTTTTCTTT
CTGAAAGACA AAAATGGAGA AATTATAGAA GACTGCATCA GTCTGGCACT GGGAGGAAAC
AAAGCTTATG CCAGGACCAT GACCAAATTC CAGGGCATGG GAACGATCTA CCTGACCCCA
ATGTGGGCTT CTAGCTGGAA GAAGCTGGGA AATGAAAAAA GTAACCGGGA CTTCAATAAG
CATTATCTAA AAAATCCACT CTACTGCCTG GCTGCAAAAA TCGATGGTGG ACTTGTAGAT
GAGCAGGAGT TCAATTCAAA TGTTAAAGAA TTTGCCTGCA CCTTTGATAT GAAAGTTGTG
AATCTCAAAG GAAGTCTGGA GATTACCGAA CAGTCCTACT TGAATGCCCG AAACGGTGCA
ACTGAAAAAC AATAA
|
|---|
| Protein sequence | MSVLSIVACG MLEDELVHVL SKDRDLQQLI VVENRESSGF LRKLRLRNCN PRTAFLDRVP
MLLKGRSNPG FIVPSRFLSS LPILKKFCKR RKLRKDISVV VNLLSLSLHT DLEILKAEVY
RNIYEMASFS DRILVFYGVC GHALGKLEED LSDLECPLFF LKDKNGEIIE DCISLALGGN
KAYARTMTKF QGMGTIYLTP MWASSWKKLG NEKSNRDFNK HYLKNPLYCL AAKIDGGLVD
EQEFNSNVKE FACTFDMKVV NLKGSLEITE QSYLNARNGA TEKQ
|
|---|
| |