| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2988 |
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| Symbol | |
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| ID | 3626631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3847695 |
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| End bp | 3849602 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637701833 |
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| Product | indolepyruvate ferredoxin oxidoreductase, subunit alpha |
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| Protein accession | YP_306463 |
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| Protein GI | 73670448 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.371879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00474189 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAAAT ATTACCCTAA ATTCGAGATG AGTTTATTGA CTGATAATAA GTTGTTAATG
GGTAATGAAG CCATTGCACT TGGAGCTATA GAAGCCGGCG TCCAGGTGGT TACAGGGTAT
CCCGGAACAC CCTCGACCGA AGCTCTGGAG ACGATTGCCC GGTATGCAAA AAGGTGCGGA
ATCTATACCG AGTGGTCCAG CAATGAAAAG GTTGCACTTG AAACGGCAGC TGGGGCAGCT
TATTCCGGGG CAAAGGCGCT TGTGACCATG AAACAGGTTG GGCTAAACGT TGCATCCGAC
CCTCTTATGA GCCTGAGCTA TATTGGGGTA AAAGGAGCTC TTGTCCTGTT AGTTGCCGAT
GATCCTGGGC CTCATTCTTC CCAGACTGAA CAAGATACTC GGGTTTTCGG GCACTTTGCA
AATATTCCTG TCCTTGACCC GGCAACCCCT CAGGAAGCCT ACGAACTGAC AAAGCTGGCT
TTTGAGCTTT CTCATGAATT CGAAATTCCC ATTATCCTGA GAACCACCAC GCGTGTCTCC
CACAGTTGCG GAGATGTCGA GGTTGAAGCT GCAGAACCTG TACCGGTTGA AGCCGTTGAG
GAAGGTTTTG TAAAGGATAG GCGCTGGACA ATCTTTCCGA AGCTTACGGC TGAAAGGCAT
CCCTGGCTTG AAAATGTGCA GGAAAAGCTT TCCGAACGCT TTTCCGGGCT TTCCTTCAAT
TCGGTATCAG GATCGGGAAA AATCGGGATT ATTGCTTCAG GCGTCTCAGC CCTTTACGTA
AAGGAGGCTA TAGAAGCTGT CAGGGGTTTT GAAGAGTTGT TTACGCTCTT CAGGGTAGGG
ACGGCATATC CGTTTCCGGA AAAGGCAGCT CTTTCTTTCC TGAAAGGCAT TGACCGGCTG
ATCGTGGCCG AAGAGCTTGA CCCTTACCTT GAAGAACAGG CGCTCCAGCT TATAGGGAAA
GCACATCTGC CTGTTGATGT TTATGGAAAA AAGAATGGCT TTTTCCCTGT GAGCGGGGAA
TACAATGTGG ATATTGTCAT TGACAGCATC AACCGCGCAC TTGCAGCGTA TGGGGAGAGT
TTGTGCCTTT CTCATGCTTC TCCTGCCGTC TCAAGAGAAA AGCTTCCTCC CCTTCCGATC
CGGGCCCCTA CTCTCTGTGC CGGTTGCATG CACAGGACTG TTTTTTATGC TTTCAAACAG
GCTGCAAAAC AGCTTAAAAA AGAGTCTCAA ACTGATACGA TTTTCTCCGG GGACATTGGT
TGTTACACCC TTGGAAATGC CTATCCTCTT AACATGGTCG ATACCTGTCT CTGCATGGGT
GCAGGAATAA GCCTTGCAGG AGGGCTCTAC CATACGAACC CGAAGACAAA ACAGGTGGCC
TTTATCGGGG ATTCTACTTT TTTCCACTCA GGCATTCCTG CAGTGATAAA CGCTGTCTAT
AACGGAGCTA ACATCACCCT TGCAGTGCTT GACAACCGTA CAACTGCGAT GACAGGACAC
CAGCCCCATC CTGGCGTAGG TGTAACTGCA CTTGGAAATG TTTCAAAAGC CATTGAAATT
GCAGACGTGG TTCGGAGCTG CGGGGTTGAA TCCGTAAAGA TAGTAAATAC TGTAGATCCG
GACAGCCTTG AGAGTTGCAT AAAAGCCGCA AAGGAAGCCA TGAATTTCAA TGGGCCGTCG
GTTCTGGTCT TCAAAGGCAA GTGTGTAGGG ATTACAAAAC CCGACAAACA TTACGAAATA
AATCCTGAAG CCTGCACAGG CTGTGGTTTC TGTATAAAAG AGCTAGGCTG CCCTGCGCTT
AACCTTGATG GGGATAAGCC TGTCATACAG GACAACTGCA GCGGCTGTGG GCTCTGTGCA
CAGATCTGCC CGTCAGAAGC CATCTGTATA GGAGGCGTAA AGCTGTGA
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| Protein sequence | MLKYYPKFEM SLLTDNKLLM GNEAIALGAI EAGVQVVTGY PGTPSTEALE TIARYAKRCG
IYTEWSSNEK VALETAAGAA YSGAKALVTM KQVGLNVASD PLMSLSYIGV KGALVLLVAD
DPGPHSSQTE QDTRVFGHFA NIPVLDPATP QEAYELTKLA FELSHEFEIP IILRTTTRVS
HSCGDVEVEA AEPVPVEAVE EGFVKDRRWT IFPKLTAERH PWLENVQEKL SERFSGLSFN
SVSGSGKIGI IASGVSALYV KEAIEAVRGF EELFTLFRVG TAYPFPEKAA LSFLKGIDRL
IVAEELDPYL EEQALQLIGK AHLPVDVYGK KNGFFPVSGE YNVDIVIDSI NRALAAYGES
LCLSHASPAV SREKLPPLPI RAPTLCAGCM HRTVFYAFKQ AAKQLKKESQ TDTIFSGDIG
CYTLGNAYPL NMVDTCLCMG AGISLAGGLY HTNPKTKQVA FIGDSTFFHS GIPAVINAVY
NGANITLAVL DNRTTAMTGH QPHPGVGVTA LGNVSKAIEI ADVVRSCGVE SVKIVNTVDP
DSLESCIKAA KEAMNFNGPS VLVFKGKCVG ITKPDKHYEI NPEACTGCGF CIKELGCPAL
NLDGDKPVIQ DNCSGCGLCA QICPSEAICI GGVKL
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