Gene Mbar_A2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2962 
Symbol 
ID3625881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand- 
Start bp3810706 
End bp3811329 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID637701807 
Producthypothetical protein 
Protein accessionYP_306437 
Protein GI73670422 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.22169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0766183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATC AGGGTCTTAC AGACCTGCCA ATGAAAGTCA AACTGCCTGA GCCAGAAGCT 
ACAGATAGAA GTCATATCGA AGACCTCATT GCAAAGCGGA GGTCTGTAAG AAGATATAAG 
GACAAGGAAC TCTCCAAGTC CGATATTTCT CGCTTGCTCT GGGCTGCTCA GGGTGTAAGT 
TCTGAGGACG GTTTAAGGAC CGCGCCCTCT GCAGGTGCTC TTTACCCTCT TGAAATTCAT 
GTAGTTATCG GAGAAGATGG CGAGCTTGAA CCTGGGGTTT ACAGGTACAT TCCTGAAGGC 
CATACACTTG TCCGGGAAAT TGCAGGTGAT ATGAGAGAGA AACTTTCAAA AGTTGCTCTC 
TCCCAACCCA TGATCAGAAA CGCTCCCGTT TCATTTGTAA TCTCCGCGGT TTATCCGAGG 
ATAACAAGCA AATACGGCAG TCGAGGCCTT CGTTATGCCC ATATGGAAGC GGGGCACACT 
GCACAGAACG TATGTCTCAT GGGAGTGGAG CTTGGAATAG GAACCTGTAC AGTAGGAGCT 
TTTGAGGACG AAGGAGTAAA AAACGTGCTT AAATTGCCGG CAAACGAAGA ACCTCTATAT 
ATTCTGCCTC TGGGTTATAT TTGA
 
Protein sequence
MGNQGLTDLP MKVKLPEPEA TDRSHIEDLI AKRRSVRRYK DKELSKSDIS RLLWAAQGVS 
SEDGLRTAPS AGALYPLEIH VVIGEDGELE PGVYRYIPEG HTLVREIAGD MREKLSKVAL 
SQPMIRNAPV SFVISAVYPR ITSKYGSRGL RYAHMEAGHT AQNVCLMGVE LGIGTCTVGA 
FEDEGVKNVL KLPANEEPLY ILPLGYI