| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2946 |
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| Symbol | |
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| ID | 3626145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3784589 |
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| End bp | 3786781 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637701791 |
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| Product | hypothetical protein |
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| Protein accession | YP_306421 |
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| Protein GI | 73670406 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.505303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00920589 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATTT CAAATGAGAC CGCAGTCGGT ATGGAAACCG TCGAGCTTGA GCCCTTGAGG
AAAGATAAAA AGAAGATTTT TGAGGATATT CTAAAATATC TTGAAACCAA TCAGAGAGGC
TATATCAAGG TTCCTACAGG CTGGGGTAAA ACCTTTCTTT CGAAACATAT AATGAAGAAG
TACTACGACG AAGGAAAACT CGTGCTTTTC CTTGTCTCGA AAAATAATCC TCTTCTTAGT
CAGACTTATT ATGACAGGAA GAAAAAACAG CCCCTTTTTC CCAACAGCGC ACTTCTCTCA
TCCGAGCATA AGGTGGACCG AAAAGAACTT GCTGAAACTT TGAGAGCTTT TGGGCAGGAA
AAGGATAAAG GTTTTGTTCT TTTTGCCTCG CTTCAGACCG TACTTGGAAA GCAGAACTCT
GAGATCAAGA ACCGGATTCT TGAACTTGCC GACCTTGCAA TCGTGGATGA GATCCACAAT
TTCATTAACA ATCGAGGAAA CGATTTTCTC AATGAATTGG GGGAAAGGAC AAAAATCCTG
GGAATGACTG CAACTCCATT TCAGGGAGTT GTTGGGAATG TTAAGTTCGT GGATGAAATT
GCAGGGGATA TGAAGGAAGT CTACTCAAAA ACCCTTCCTG AATGCATCCT TGACAACGAA
CTTGCTCCCC TTAAGTACAC AATTGCCGAG AGTTCGGAGG ATATCTTTGA GATCTTTGAT
TTCGAAAGAG GGCTTGATGA ACTTGATAAG CAGGACCTTT TTCTTGACTG CAGCACTCCT
GACAGGTTGA AAAAAGTTAT TCGACGGACT CAGCTTGCAA AAGATGTGTA TGATTCTATG
ATAAAACACA AACATGCAAA AACACTTGTC TTTTGCGCCC CTGTGAGGAA GCGGGTCTAT
GGGGTGGGAG CTGATGGCAA GGAAATTAAT GCTTTCCATG CAAAGCTTAC CTCTTCGGTC
TTCAATGGGG AAATTTCAGT TCCGGAGTCC GAAAAGGATC CTGAGCTTAT CCTGCCCGTA
AATTTTGAGA ATTATACCCC TGAAGGCAAG TTCCGAGATG CGGTATTTAT AAGCTCAGAG
CTGCCCAAAA ATGAACAAAA TACCATTCTT GCAGCTTTCA GAGAAACTGG AAAGCCTCCT
TATGTGATGT GCACTGTGGG CATGCTGATT GAAGGTTTTG ATTTCCCGGG ACTTGAAGCC
CTTGTTTTGC TGCGCCCTAC TCTAAGTATG AGGCTTTTTG AGCAGCAGGT AGGAAGGGTA
ACAAGGCTTT CTCCAGTCTC AGGAAAGCAA CAGGGCAATA TCTTTGAGAT TTCGGATAGT
ATTGACTCTC TCTACAAGCG CTTTGGGGAA GGTGTTTTTT CCGGGGAAAA GGTTGACCAG
GTGCAGATGC TCCAACCTGA AATCCGCCTT GAAGAACTTT TCTCAGAAGG AGATGCAGCC
AGGGCAATTG AGGAAGGAAA GATCGAGATT AAGAAGGTAG AATTTGGACC TCAAAGAAAA
GGGAAGGGAA AAAGAAAAAG GGCTCAGATT CGGGAAATCC CGGTAAGGCT TCCTCCGACA
TCCATCCGGG CAAAGTATTT TTCGCGCCTG CTCGCACTGA CCGAGGAGAA GGATATAGGA
GCTTTTGAGC GGGAAAAGCG TGAACTCATG AGGGCTACCC TGAGGTTCCG TGTCAGGGAA
CTCAGGGACG CAGAAGAGCT TGCAGAGCTT GCAAGCAATA TAAATAAGCT CAAGAGGGAA
GCCTATGAAG ACCGCAGGTT AGGAGATGTT TCAAGGCAGC ATAAACCCAA GGTTTTCGGG
GAAGTCGAAT GGCTGCTGAA ACTTCAGGCC CTGAATTCCC TCAAGTATAA CGGTGGACAC
CTTTCGATGC CCGAGAAAAA CCGGATCTTA AAAGCTCTGA ATTTCGAGCC CGATTTCCGA
AAGATAGACA GCCTCAGGCT TAAATGCCTG AAACTCGGTT CGGCCCAGAA GACTATCCCT
GAACTTGTAA AGGTGCTTGG GTTCGTAAGC CGTCTTTCGT CTTCGGAAAC CTACCAGTTC
CTCGACAAGA AGAAAAAGGA ACACTGGAAA AGGGAGTTCC TGCCTGCGGT TTACTGGGGT
TTCTGCTTCA TCGATGATTC TCCTGAACTG AAGGAACTTT TTGAGTCTAC GGAATGGGAC
AGGCGGGTCA AAAATATTAT CAGGCAAAAA TGA
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| Protein sequence | MTISNETAVG METVELEPLR KDKKKIFEDI LKYLETNQRG YIKVPTGWGK TFLSKHIMKK
YYDEGKLVLF LVSKNNPLLS QTYYDRKKKQ PLFPNSALLS SEHKVDRKEL AETLRAFGQE
KDKGFVLFAS LQTVLGKQNS EIKNRILELA DLAIVDEIHN FINNRGNDFL NELGERTKIL
GMTATPFQGV VGNVKFVDEI AGDMKEVYSK TLPECILDNE LAPLKYTIAE SSEDIFEIFD
FERGLDELDK QDLFLDCSTP DRLKKVIRRT QLAKDVYDSM IKHKHAKTLV FCAPVRKRVY
GVGADGKEIN AFHAKLTSSV FNGEISVPES EKDPELILPV NFENYTPEGK FRDAVFISSE
LPKNEQNTIL AAFRETGKPP YVMCTVGMLI EGFDFPGLEA LVLLRPTLSM RLFEQQVGRV
TRLSPVSGKQ QGNIFEISDS IDSLYKRFGE GVFSGEKVDQ VQMLQPEIRL EELFSEGDAA
RAIEEGKIEI KKVEFGPQRK GKGKRKRAQI REIPVRLPPT SIRAKYFSRL LALTEEKDIG
AFEREKRELM RATLRFRVRE LRDAEELAEL ASNINKLKRE AYEDRRLGDV SRQHKPKVFG
EVEWLLKLQA LNSLKYNGGH LSMPEKNRIL KALNFEPDFR KIDSLRLKCL KLGSAQKTIP
ELVKVLGFVS RLSSSETYQF LDKKKKEHWK REFLPAVYWG FCFIDDSPEL KELFESTEWD
RRVKNIIRQK
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