| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2941 |
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| Symbol | |
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| ID | 3626140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3774118 |
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| End bp | 3775800 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637701786 |
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| Product | hypothetical protein |
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| Protein accession | YP_306416 |
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| Protein GI | 73670401 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000171884 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0147454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAAA TTATGAATCC CTTAGTAGAT TTATTAGCAA CAAATCGTCA AGAAATTATA
TCACATTTAG TTTTTCCTAT TATTCTTACT ATTTTTACTA GTATTTTTAC TAGTACTATA
AGCGCAATTC AATTACACTA CTTAGATTTA AAAGAAAAAA ATCGATATCT TAACCTTTTA
AAAATAAATT ACCCCAGTGT AGAAGCAGTT GTCGATACAA TAAAACAGTT TAAGAGAATT
AGTCATATTT ATTTTGTTCA CATTTTACTT TTTGGTTTGT TTCTAGGTGA GTTGTTCTCC
TTACTATTTA TATTTACATT CTCTAAACTT GATATTATTT CCAAGTTATT CAGAAAATAC
ATTAGTTTAA CTAACATTAG TGACATTGGT CTCTATTGTT ATGCCCTTTT CTTATTAGTA
ATCATGCCGG TTTTAATTTA TTTGACAGTG TATCTACTTT GTTGTTTTAT TAAATCAAAG
TGTCCTTTAA CTAAAATCGA TAATGATTTT TGTAAACTAA GAAATTCACA GATATTGTCC
TATTTTTCAT ATTGGCTTTC AGTGGGATTA ATATTAGGAC CTTATGTCTT TGGAACTTTA
TTCGTCTACA TCATGATAAC GAATCCATCT TTTTCGCATG ATTTTCATTG GAAACCCAAT
GATAAATTTG CTCTGGTTTT TACTATAATT CTATTCCTTC TAGTTATTTT TCTAAGCCTC
ATTATTTTAG GTGATATATT TAAAAATATT AAACAGTTCC CTAAAAACGT TATAGATCCA
ATAATAAATC ATTATCAATG CAATTTTCCA AATTTAACAA TAAAAACTGA TTCAGAGGAA
TTCCAGGGTA AATTAAAAGA TTTTCAAAAT AAATTTTTAG TCACTTTATG TGAAGGAGGT
ATACTACATT TTATATCTTG GGATAAAATT GAGACAATGA AAGCTAGTGA CACAAATAAA
AACGAATGCA CTGCTTATGG TGAACCGAAG AAAAAAAAAT ATATCAGTGT AAAATTTGTT
GCTAGTACAT TAATTTTGTC TGTATTGTTA GTAGGCTTGT ATACAATTTA CCACGCTAAC
AGCCCGTATA ATGAGGTTAA TGATCTAATG GAATTAGGTA GAGATGAAGA TGCATTAAAA
GTAATTAATA AATCCATAGA TATAGACCCT AATAATGACT ATGCTTGGAA TATAAAAGGT
AATGTTCTGT ACCATTTAGG CAGGTACGAT GAAGCATTAC AAGCTTATGA CAAAGCCATA
GCGATAAATC CTAATTATGT CGATGCCTGG AATAGCAAAG GTAATGCCTT ATATAGATTG
GGCAAATACG ATGAAGCATT ACAAGCAAGC AATAAAGCCA TAGCGATAAA CCCTAATTAT
GCCGATGCCT GGAATGGCAA AGGTAATGCC TTATATGGAT TGGGCAGATA CGATGAAGCA
TTACAAGCTT ATGATAAAGC CATAGCGATA AACCCTAATT ATGCCTATGC CTGGAATGGC
AAAGGTAATG CCTTATATAG ATTGGGCAGA TACGATGAAG CATTACAAGC ATATGATAAA
GCCATAGCGA TAAACCCTAA TTATGCCGAT GCCTGGAATG GCAAAGGTAA TGCCTTATAT
GGATTGAGCA GATACGATGA AGCATTACAG GCAAGCAATA AAGCTACAGA ACTAAAGAAA
TAA
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| Protein sequence | MWKIMNPLVD LLATNRQEII SHLVFPIILT IFTSIFTSTI SAIQLHYLDL KEKNRYLNLL
KINYPSVEAV VDTIKQFKRI SHIYFVHILL FGLFLGELFS LLFIFTFSKL DIISKLFRKY
ISLTNISDIG LYCYALFLLV IMPVLIYLTV YLLCCFIKSK CPLTKIDNDF CKLRNSQILS
YFSYWLSVGL ILGPYVFGTL FVYIMITNPS FSHDFHWKPN DKFALVFTII LFLLVIFLSL
IILGDIFKNI KQFPKNVIDP IINHYQCNFP NLTIKTDSEE FQGKLKDFQN KFLVTLCEGG
ILHFISWDKI ETMKASDTNK NECTAYGEPK KKKYISVKFV ASTLILSVLL VGLYTIYHAN
SPYNEVNDLM ELGRDEDALK VINKSIDIDP NNDYAWNIKG NVLYHLGRYD EALQAYDKAI
AINPNYVDAW NSKGNALYRL GKYDEALQAS NKAIAINPNY ADAWNGKGNA LYGLGRYDEA
LQAYDKAIAI NPNYAYAWNG KGNALYRLGR YDEALQAYDK AIAINPNYAD AWNGKGNALY
GLSRYDEALQ ASNKATELKK
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