Gene Mbar_A2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2895 
Symbol 
ID3627790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3710628 
End bp3711506 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content44% 
IMG OID637701743 
ProductO-linked N-acetylglucosamine transferase 
Protein accessionYP_306373 
Protein GI73670358 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0140366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAA ACGAGTGGTA CAATACAGGT GTTGCACTCC AGGAACTTAG ACGATTTTCA 
GAAGCTCTGG ATGCATACAA TAAAGCTCTG GAAATAAGCC CTGACAATGC AAAAATCCTG
TTTAGCAAAG GTATGGTTCT GAAAAGCCTT TTCAGATATG ATGAAGCTCT GGATGCCCTT
AATAAGTCTC TTCAGATCAA TCCTGCGGAT GCGAAGACCT GGTACTCCAA AGGTGAACTG
CTTGTAGGCC TTATGCAGTA TAGGGAAGCT CTGGATGCAT ACTACCGGGC TATATATCTT
GCTCCTGAAG ATCCTGAAGT CTGGTACAGG CGGGGAATGG CTCTGAGGGA GATGAAGGCA
TACGAAGAAG CCATGGATGA TTTTGAGAAA GCTATTCACC TTTATGAGAA GAATTATGAG
CTGGGCTCTA TGAGCGCAAG TGAATGGTGC AAGAAGGGTA TGGGACTCTG CAAGGTAAAG
AGTTATGAAG AAGCCATTGG CGCTTTCAAC AGGGCTCTTG AGTTAAACCC TGCAAATGGG
AAGGCCCTTT ATAACAAGGG TGTAGCTCTC CGCTGGCTTG GAAAACACGA TGAAGCAAAA
CTTTATACCG AAAAAGCCGT GGAAATTTTT GACGCCAAGA TAAAGACAAA TCCCGATAAT
GCCCGGTTCT GGTATAACAA GGGAATTGCC CTGAGAGACC TGGAAAAATA CAAAGAGGCA
CTTCAAGCTT TTGAGAGAGC TATCGATATC AATCCAAGTT TTACAAAAGC CTGGATTGGT
AAAGGCATCG TATATGACAG GATTAAGAAA CACCAGAAAG CGATGGAGGC CTATGAGAGA
GCAGTCGATA TAAACCCGAT ATATTCTGAT CTCCTTTGA
 
Protein sequence
MTSNEWYNTG VALQELRRFS EALDAYNKAL EISPDNAKIL FSKGMVLKSL FRYDEALDAL 
NKSLQINPAD AKTWYSKGEL LVGLMQYREA LDAYYRAIYL APEDPEVWYR RGMALREMKA
YEEAMDDFEK AIHLYEKNYE LGSMSASEWC KKGMGLCKVK SYEEAIGAFN RALELNPANG
KALYNKGVAL RWLGKHDEAK LYTEKAVEIF DAKIKTNPDN ARFWYNKGIA LRDLEKYKEA
LQAFERAIDI NPSFTKAWIG KGIVYDRIKK HQKAMEAYER AVDINPIYSD LL