Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2879 |
Symbol | |
ID | 3627774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3691136 |
End bp | 3691819 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701729 |
Product | hypothetical protein |
Protein accession | YP_306359 |
Protein GI | 73670344 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0370735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.343417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCAT TTGTAGGCAC TAGCGGTTGG TATTATGATT GGAACAAAAA GAAGAACCTT GATTGGTTTA TCCAGAACTC CGGGCTGAAC AGTGTTGAAC TTAATGCCAG TTATTACAGG TTTCCCTCAC CTGAGCAGAT TGAAGGCTGG AACAGTAAGG GGACTGGACT CCGATGGAGC ATAAAGGTGC ACAGGTCTAT AACCCACTGG CGACAACTCA GTGAAAGTTC CCTGGAAACT CTGGGAAATT TCCTTGAGCT TTTCCGACCC ATGGACCATC TCATTGATTT TTACTTATTC CAGGTGCCTC CAAAGTTTGA CGATGTCGAA AGGGCACTCA GGTTTGTAGA AGCCGTAAAA CTTGGGAAAC GGTTTGCCCT GGAGATAAGG AATAAAGCCC TGCTGGGAAA TGATGAGGCG TGTGAAGAGC TGATGAAGAA AGTGACCCTT GTGTCCGTAG ACTCGCCGGA CTACAAAAAC CGCATTTTCC CCGGAAAAAA CGTGTATATG AGAATGCACG GAAGAGAAGA CTGGTACAGT TACGATTATT CTCAGGCGGA AATTAGCGAA ACTATCAGGA AAATACATGA ATTCGGGCCT GAGAAGACCT ACATTTATTT CAATAACAAC CATAATATGC TGGATAATGC AAGAAAGGCA TTGAAGGTCT TTTCAGGTTT GTAA
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Protein sequence | MEAFVGTSGW YYDWNKKKNL DWFIQNSGLN SVELNASYYR FPSPEQIEGW NSKGTGLRWS IKVHRSITHW RQLSESSLET LGNFLELFRP MDHLIDFYLF QVPPKFDDVE RALRFVEAVK LGKRFALEIR NKALLGNDEA CEELMKKVTL VSVDSPDYKN RIFPGKNVYM RMHGREDWYS YDYSQAEISE TIRKIHEFGP EKTYIYFNNN HNMLDNARKA LKVFSGL
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