Gene Mbar_A2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2879 
Symbol 
ID3627774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3691136 
End bp3691819 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID637701729 
Producthypothetical protein 
Protein accessionYP_306359 
Protein GI73670344 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0370735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.343417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCAT TTGTAGGCAC TAGCGGTTGG TATTATGATT GGAACAAAAA GAAGAACCTT 
GATTGGTTTA TCCAGAACTC CGGGCTGAAC AGTGTTGAAC TTAATGCCAG TTATTACAGG
TTTCCCTCAC CTGAGCAGAT TGAAGGCTGG AACAGTAAGG GGACTGGACT CCGATGGAGC
ATAAAGGTGC ACAGGTCTAT AACCCACTGG CGACAACTCA GTGAAAGTTC CCTGGAAACT
CTGGGAAATT TCCTTGAGCT TTTCCGACCC ATGGACCATC TCATTGATTT TTACTTATTC
CAGGTGCCTC CAAAGTTTGA CGATGTCGAA AGGGCACTCA GGTTTGTAGA AGCCGTAAAA
CTTGGGAAAC GGTTTGCCCT GGAGATAAGG AATAAAGCCC TGCTGGGAAA TGATGAGGCG
TGTGAAGAGC TGATGAAGAA AGTGACCCTT GTGTCCGTAG ACTCGCCGGA CTACAAAAAC
CGCATTTTCC CCGGAAAAAA CGTGTATATG AGAATGCACG GAAGAGAAGA CTGGTACAGT
TACGATTATT CTCAGGCGGA AATTAGCGAA ACTATCAGGA AAATACATGA ATTCGGGCCT
GAGAAGACCT ACATTTATTT CAATAACAAC CATAATATGC TGGATAATGC AAGAAAGGCA
TTGAAGGTCT TTTCAGGTTT GTAA
 
Protein sequence
MEAFVGTSGW YYDWNKKKNL DWFIQNSGLN SVELNASYYR FPSPEQIEGW NSKGTGLRWS 
IKVHRSITHW RQLSESSLET LGNFLELFRP MDHLIDFYLF QVPPKFDDVE RALRFVEAVK
LGKRFALEIR NKALLGNDEA CEELMKKVTL VSVDSPDYKN RIFPGKNVYM RMHGREDWYS
YDYSQAEISE TIRKIHEFGP EKTYIYFNNN HNMLDNARKA LKVFSGL