| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2853 |
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| Symbol | |
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| ID | 3627021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3650536 |
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| End bp | 3652179 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637701703 |
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| Product | surface layer protein B |
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| Protein accession | YP_306333 |
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| Protein GI | 73670318 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0013219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00194524 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTA ACAAGAAACT TGGTTTAATA TCGATAGCGC TGATTTTATG TTTAATCATT
GTTTCATCTA CTGCATCAGC CGCTACTATC AATGTAGGAC CCAACGAAAA ATACAAGACA
ATTCAAAAGG CTGTGGACGC CGCTTATAAA GGGGATACGA TTATTGTTAA TTCTGGAACC
TACCCTGAGA ACGTTCATAT TACAAAAGAT AACTTAACAA TTCTTGGAAA GGAGTATCCA
AAGGTTTATG GATTCTATAA TGCTGAGGAA TCTAATGATG ACTTCGGCAG AGAATATATT
AATATCAATG GTTTCTCTAT CACTAAAAAC GGAATTGATT TAGTTGGTAG AGCAGCACGT
GGCCAAATAA TAAAAAATAA TTATTTCCAT TCTTGTGGTG TTTCTTTTGA TGGAGATATG
GCTTCTGGTA CTATCGAAAG TAACTATTTC ACAAATGGTG GGATTTTTTT AAGTCAAGCT
TCAGTAAATA TAACCGGAAA CGAAATTAAG AATGCGGATG TTGGAATTTG GTTAGCTCAA
GGAGCTGGAT CAGGAACATA TGCATCAATT TCAAACAATA AGATAATTGG GTGTAATGTA
GGAATTAAGT TTTATCATGA AAGTAGTTCT CCTGGTATTT ATAACAATTA CTTTAGCAAC
AAAGAGAACG TAGTATTCGA TTCATCGTGG AAAAGCGCTG TAAGCTGGAA TACTACTAAA
ACCGCAGGTT CTAATATCGT TTCAGGACCT TACATTGCCG GGAACTTCTG GGGCTCCCCT
GATGGCGAAG GTTTCTCTCA GACAACTTCT GATAAGAACC ATGATGGAAT TGCAGATTCC
CCCTATGTTC TAGACAGTAA AAATATTGAC TACTTGCCTC TGGTTGCTAT TAAAACTCCG
GTAAACACCC CGGTAGCTTC TTTTAATATG TCAAAATCAA GCGGGAAAGC ACCATTAAAG
GTTAAATTTA CTGACACAAG CACTGGCTCC CCAACTTCCT GGTTCTGGAA CTTTGGAGAT
GGGTCAAAGT CATACCTCCA GAACCCGGTT CACAAGTATT CAAAAGCAGG AACATATACT
GTTAGCTTAA CAGTAAAGAA TGCTAAAGGC AAGAACACGG TAACAAAAAC AGATTGTGTA
AAAGTGATAA CAAAACCAGT TGCTGTATTC TCTGCATCTC CAACCTCTGG AAAAACGCCA
TTAAAGGTTA AATTTACTGA TACAAGCACT GGCTCTCCAA CTTCCTGGTT CTGGAAATTT
GGAGACGGGT CAAAGTCATA CCTCCAGAAT CCGGTTCACA AGTATTCAAA AGCAGGAACA
TATACTGTTA GCTTAACAGT AAAGAATGCA GCAGGACTTA ACAAGGTAAC AAAAACAGAA
TATATAAAAG TGATAACAAA ACCTGCTGCA AACTTCACCA GCAGTGTTAC ATCAGGAAAA
GCACCATTAA AGGTTAAATT TACTGACACA AGCACAGGAA TACCTGCTAA ATGGAGATGG
GATTTTGGAG ACGGATCAAA GTCATTCCAT CAGAATCCGG TTCACAAGTA TTCAAAAGCA
GGAACATATA CTGTTAGCTT AACAGTAAAG AATACTAAAG GTAAGAACAC GGTAACAAAA
ACAAAATATA TAAAAGTTGT ATAA
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| Protein sequence | MKINKKLGLI SIALILCLII VSSTASAATI NVGPNEKYKT IQKAVDAAYK GDTIIVNSGT
YPENVHITKD NLTILGKEYP KVYGFYNAEE SNDDFGREYI NINGFSITKN GIDLVGRAAR
GQIIKNNYFH SCGVSFDGDM ASGTIESNYF TNGGIFLSQA SVNITGNEIK NADVGIWLAQ
GAGSGTYASI SNNKIIGCNV GIKFYHESSS PGIYNNYFSN KENVVFDSSW KSAVSWNTTK
TAGSNIVSGP YIAGNFWGSP DGEGFSQTTS DKNHDGIADS PYVLDSKNID YLPLVAIKTP
VNTPVASFNM SKSSGKAPLK VKFTDTSTGS PTSWFWNFGD GSKSYLQNPV HKYSKAGTYT
VSLTVKNAKG KNTVTKTDCV KVITKPVAVF SASPTSGKTP LKVKFTDTST GSPTSWFWKF
GDGSKSYLQN PVHKYSKAGT YTVSLTVKNA AGLNKVTKTE YIKVITKPAA NFTSSVTSGK
APLKVKFTDT STGIPAKWRW DFGDGSKSFH QNPVHKYSKA GTYTVSLTVK NTKGKNTVTK
TKYIKVV
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