Gene Mbar_A2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2848 
Symbol 
ID3627016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3644528 
End bp3644983 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637701698 
Producthypothetical protein 
Protein accessionYP_306328 
Protein GI73670313 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0331017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0138048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATG CAGCAGGAAA AATAGGTAGA GTATTTACCG TAAGGATCGA TTCTGGAGAC 
GACTTGATTC TGGAACTGAT TAAACTTGCT GAACTGGAGC GCATCGAATC TGCTGTTTTC
GTATTGCTTG GCGCATTAAA AGAGGCAAAG ATTGTCACAG GCCCTAAAGA AAGTATAATC
CCTCCAGAAC CTGTATGGTC CGGCTTTGAC GATGCACATG AGATTCTGGG AATTGGAGAT
ATTTTTTTAA TGGAAGGAAA GCCTAAGATC CATCTGCATG CAGGCGCAGG CAGGGGAGAT
AGTGTAAAAC TCGGGTGTTT GAGAGGAGAA AGCGAAGTTT TTATGGTAGT TGAGGCTTTT
GTCTTCGAAC TTGAAGGATT TTCTGCCAGA AGAATTGCAG ATAAGGAACA GGGCTTTGCC
CCTGTAGGTT TTGAGCGAGT TTTAGATATG AAATGA
 
Protein sequence
MEYAAGKIGR VFTVRIDSGD DLILELIKLA ELERIESAVF VLLGALKEAK IVTGPKESII 
PPEPVWSGFD DAHEILGIGD IFLMEGKPKI HLHAGAGRGD SVKLGCLRGE SEVFMVVEAF
VFELEGFSAR RIADKEQGFA PVGFERVLDM K