| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2845 |
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| Symbol | |
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| ID | 3627013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3638226 |
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| End bp | 3641108 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637701695 |
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| Product | cell surface protein |
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| Protein accession | YP_306325 |
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| Protein GI | 73670310 |
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| COG category | [R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system
[COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.726454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0327621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGTAA ATAAATTAAC CGTTTTTTTA GTGATTACTA TCTTTTTTAT TATTGTGACA
TATAACCCTG CATCCGCCAG GGAGATTACA GTAGATAGCA ATGTTTCAGA TGCAGATTTC
CGCTCTATTC AAGAAGCAGT AAACAATTCT TCTCCTGGTG ATGTGGTTTT AGTTTCCCCA
GGAATTTATA GAGAAAGTGT GGATATAGAA ATACAGAATA TAAGCATCCT TTCGGAGTCT
GGAAATCCCA AAGACACTTT TGTTAGGGCT TTTAACGTAA GCACGAATAA TATTACTGTA
AGCGGATTTA GTATAGAAGA AATCTTAAAC TTACGAGGAC ACAGCGACTA TTATTACTAT
TACAACTATC CAGCTGAAAA CTGTACTATT AAAAATAATA TTTTGAAATC GGGTATTTAT
AGTAACGAAT GTTTCAATTC AACTATTGAG AAAAATATAT TTTTAAAATC AGGTATCAGT
GTATATGGTC CTGATAAAGG TTCTTTTACA ATTTCTGACA ATTTAATTGT TAATGGGGAC
ATTGATTCTC ATCTGGGACC AAATATTGAT TTGCTTAACA ATACCATTCT AAAGGGTAGT
ATAAGATTGG GTGAAGGTGG GAACAACAGA ATTATTGGAA ATTATATTTC AAATAGCTCA
TATTTTGGAA TTAGCTTCTG GGAATCTTAT TCCAATGAGA TCGAAAATAA TACGGTTGTG
AATTGTAGTA ACGGCATCTC CATAGAGTTT CTCTCATCGC AGAATATAAT CAACAATAAC
ACCCTGATTT GTAATGATAA AGGAATTTTA GTTGGAGGAC ATGTATCAGG GGAAAACATA
ATTTCAAATA ATACAGTCTC AAGCAGCAAT ATAGGAATAC TGTTGAGCGG TTCGAGCTCA
GTTGGAAATC CGGCAGGAGG CAATTCACTA TTAGGCAACA CTATCTCAAA CAACAATATC
GGGATATTGT TCGAAGGTTA TTCTTCTAGT AATCTGGTGA GAAATAACAG GGTGGAACTA
AACAAGCAAT GCGGAGTATA TATCAACAAC GTCGGATGTG GAGCGCGATA TGGTTCTACT
AACCAGTTCT ACAACAACAT CTTCAATAAT ACAATCAACT TCTTTAACGA CACGAGTAAT
TATACACATG ATTATACGAG TATCTATACA GGCAATTCCT ATACTATACA ACCAATAGGC
AATGGAACCG GCATAGTTCC TGTTGCCTTG AATACCATAA AAACCTCAGG CACTAATATT
GTAGGTGGAC CTTATATTGG TGGTAATTAC TGGGCAAAGC CTGATGGAAC CGGTTTTTCG
CAAATCTGCG CTGATTCGGA TGGAAATGGA ATTGGCGACC TGCCTTACAA TATAACCGAG
AATGAGACTG ATTATTTCCC TCTTGTATCT TCATCAAGAT CAAAAGAAAC AATAATTCCC
GTTGCAAATT TCAGTACTAA CATCACGCAT ACTCTTGTCC CACTTTCTGT CCAGTTTATA
GATCTTTCAC GAAATGCAGT TGCATGGAGT TGGGACTTTG ACAATAATGG AATGCCGGAT
TCTACAAGCC AGAATCCGGT TCATGTGTAT ACATCACCGG GAACTTACAT TATCAACTTA
ACAGCAAGCA ATGGAAAAGA GACATCCTCA AAAACTCACG AAATAATTGT GCAAGAAGCT
AAAGTTCCTC CTGAAGCAGA ATTCTATGCA AATGTTACAG GCGGACAGGT TCCTCTTTCA
GTCCAGTTTA CAGACCTTTC AAAAAATACA ACAGCAGTAG TATGGGATTT CAACAGTGAT
GGAATTCCTG ACTCTACAGA AAGAAATCCA GTTTATGTAT ATACCTATCC TGGAAACTAT
ACCATTAATC TGACAGTAAA CAATATAAAA GGCATGGATT CAAAATCATC TACAGTAACA
GTATCTCCTT CACAACGTCT GGAAGGTAAA CTCATCCTAA CGGAATATCA GATTACTACC
AGTGAATTGG ATGAGACACA ACCTGCAATC TACGAAGACA GAATTGTATG GCAGAGTAAT
TGTAATGGAA GTTATACTTT ACATCTATAC AATATATCCA CTTTTTCGGA AACTCCAATT
GTTAGCAGAA ATAATTCTGA ATTTTACCCC GCTATCTATA ATGACAGGAT TGTGTGGCTG
GAATCCGGGA ACATATACCT GTACAATCTC TCAACTTCTA CTAAAACTCT GATCTCAAAT
CAATTGGGAA TATATCCTGC TATTTATGGT GATAAGATTG CCTGGCAGGG TGAATGTAAT
GGAGATTGTA TATATATGTA TGATGTATCC AGCTCAAAGC AAGCTCGGAT AACAAACAAT
AAATCATCAT CTTATCTGCC TGCTGTCTAT GGGAACAGAA TCGTGTGGGA GAGTCGTCGC
ATTGCCAATG GATCTTCTAA TATCTTTACG TATGATCTCT CTACTGAAAA GGAAACTCAG
ATAAGTACAG ACGAATCCTA TCAGCAATCT CCTGCCATCT ACGGGAACAG GATTGTCTGG
GGAGATTACC GCAATGGAAA CAAGGATATC TATATGTACA ATTTATCTAC TTCCGAGAAA
ATCCAGATAA GCACCAGTGG ATTAGCATTC GATCCTTCTA TCTATGGAAA CAGAATAGTA
TGGCGGGATA GCCGCAACGG TAAGGAATAC ATAGAGAACT CAAATATCTA CATGTACGAC
CTTTCCACTA AAAAGGAAAC TCAAATTACC ACTAGTGGAC CAGCAAGCTC TCCAGCTATT
TATGGGAACA AGATCGTATG GGAAGATAGA CGCAATGGAG ATGCCGATAT CTATATGTGC
ATTATCTCGG AACAGAGGGA AGAATCACCT GATGCAGATT TTTCTGCATC CTCTATTTCT
TGA
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| Protein sequence | MWVNKLTVFL VITIFFIIVT YNPASAREIT VDSNVSDADF RSIQEAVNNS SPGDVVLVSP
GIYRESVDIE IQNISILSES GNPKDTFVRA FNVSTNNITV SGFSIEEILN LRGHSDYYYY
YNYPAENCTI KNNILKSGIY SNECFNSTIE KNIFLKSGIS VYGPDKGSFT ISDNLIVNGD
IDSHLGPNID LLNNTILKGS IRLGEGGNNR IIGNYISNSS YFGISFWESY SNEIENNTVV
NCSNGISIEF LSSQNIINNN TLICNDKGIL VGGHVSGENI ISNNTVSSSN IGILLSGSSS
VGNPAGGNSL LGNTISNNNI GILFEGYSSS NLVRNNRVEL NKQCGVYINN VGCGARYGST
NQFYNNIFNN TINFFNDTSN YTHDYTSIYT GNSYTIQPIG NGTGIVPVAL NTIKTSGTNI
VGGPYIGGNY WAKPDGTGFS QICADSDGNG IGDLPYNITE NETDYFPLVS SSRSKETIIP
VANFSTNITH TLVPLSVQFI DLSRNAVAWS WDFDNNGMPD STSQNPVHVY TSPGTYIINL
TASNGKETSS KTHEIIVQEA KVPPEAEFYA NVTGGQVPLS VQFTDLSKNT TAVVWDFNSD
GIPDSTERNP VYVYTYPGNY TINLTVNNIK GMDSKSSTVT VSPSQRLEGK LILTEYQITT
SELDETQPAI YEDRIVWQSN CNGSYTLHLY NISTFSETPI VSRNNSEFYP AIYNDRIVWL
ESGNIYLYNL STSTKTLISN QLGIYPAIYG DKIAWQGECN GDCIYMYDVS SSKQARITNN
KSSSYLPAVY GNRIVWESRR IANGSSNIFT YDLSTEKETQ ISTDESYQQS PAIYGNRIVW
GDYRNGNKDI YMYNLSTSEK IQISTSGLAF DPSIYGNRIV WRDSRNGKEY IENSNIYMYD
LSTKKETQIT TSGPASSPAI YGNKIVWEDR RNGDADIYMC IISEQREESP DADFSASSIS
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