| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2834 |
|---|
| Symbol | |
|---|
| ID | 3627077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3618451 |
|---|
| End bp | 3620535 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637701684 |
|---|
| Product | PgPepO oligopeptidase |
|---|
| Protein accession | YP_306314 |
|---|
| Protein GI | 73670299 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0726503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.179326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA ATGGAATAAT AAGTCTGTTC ACTTTTGGCA TCTTACTGGT TAACACTTTA
ACGATTGTAG TCTTGGGCTC TTCCGAAACT TTGAGGAGTA ACATGAGCAC TTCAGAAAAG
GAAAAAGCTT TCGACCCCGA AAGTATGAAT CTTTCAATAA AACCTGGAGA CGACTTCTAT
GAATATGCTG AGGGAGACTG GATAAAAAAC CATCCTGTGC CCCCTGACAA ATCCCGATAC
GGAGAGTTTG CAATAGTAAA GGACAGGAAT TATGACCGTG TCAAAGAAAT AATGGAGAGA
GCAGCTAGCA ATACCTCAGC TCCTGATGGA AGCCTAGAGC AGAAGATTGG CAGGTTCTAC
AGTATGGGAA TGAATAATGC CACTCTGGAA AAGCAGCATC TTGACTCAAT CAAAAGCGAG
CTTAAGATGA TAGACAATAT CTCCAATGCC TCCGACCTCC AGACCGTTTC GACGCAAATG
ATGGAATACG ACCTAGATAC TTTCTTTTCA ATGTATGCTG CACCCGACAA AAAAAACAGC
AAGATCATGA TTGCAACTCT TACTCAAGGA GGGTTAGGCC TCCCAGATAG AGATTTCTAT
TTCAGACAGG ACAATGAATC TATCAAGATC AGAGAACAGT ATTTGACTCA TGTTACCAGG
ATGTTTGTCT TCCTCGGTGA TAGTCCAGAG ATTGCTGAGA ATAATGCCAG GACCGTGATG
AGGATAGAGA CCCGGCTGGC CAATGCATCA TTTACCAATG TGGAAGACAA CGATGAGGTC
AAAACGTATA ACAAGATGAG CCTTGAGGAG CTTCAGGCCT TTGCACCAGG CATTAACTGG
TCTTGTCTCT TCGTCTCTCT TGGTCATCCG GATGTAGCCG AGGTCAACGT CAGAAATCCT
TCATATTTTA AAGAGTTGAG CAGCGCCCTT CAGGACGAGA ACATAGATGA TTGGAAGACT
TTCCTGCGCT GGAAGCTTAT TTTAGGGACA TCACCTTACC TGAGCTCCGA CGTAGAAGAG
GAACACTTTG ATTTTTATGG AAGAAAACTC AATGGCCAGC AGGAAATGAA GCCCCGCTGG
AAGAGGGTTA TTGATGCGGA AAACGAGGCT ATGGGCGAGG CCGTAGGCCG TGTCTATGTG
GATAGATATT TTGATCCAGG CTCCAGGGCC AGGATGCAGG AGATGGTATT GAACCTGAAA
ACGGCCTTCA GGGAGAGAAT TCAAGACCTG ACATGGATGG AGCCTGAAAC CAAAAAAGAA
GCTCTCAAAA AGCTTGAAGT TCTGGAGGTG CAGGTAGGCT ACCCGGATGA ATGGCTGAAC
TATTCAGAGC TTGAAGTTAA AAACGACTCA TATGCCATGA ATGTCCTAAG GGCCTCTAAA
TTCAAGTTCC ATCACGGCCC CAGCGGTCTG GATAGAATAG GCCAGCCCGT AAATCGCAAG
CTGTGGGAGA TGAATCCCCA GGAGACTAAC GCCTATGCGG ACTACAATAA AATAATTATA
GTCTTCCCGG CAGGCATTCT TCAGCCTCCT TTCTTCAATA AAGATGCCGA CGACGCTGTT
AATTACGGTG CCATAGGTGC TATTATAGGG CACGAGATGA CTCACCACTT CGACAGCCAG
GGCAGAAAGT TCGATGCAAG TGGAAATTTA ACAGATTGGT GGACACAAGA AGATGCCGAT
AACTTCAACA AAAGCACGGA GGTTCTGGTA GACGAGTATA ACAGGTTCGA GGTTCTACCT
GGCCTGTACG TCAATGGCAA CCTGACCCTG CCTGAGAACG TAGCAGATTT CGGCGGGTTG
ACCGTGGCTT ACCATGCTTA TAAGCTCTCA CTGAAAGAGG AGCCGGATAT AATCGATGGA
TTCACTGGAG ATCAGAGGTT CTTTTTAGGC TTTACTCAGG TGTGGAGGGA ATCGGACACA
AACGAATTGC TGAGGACGTT AGTACTGACT GATACCCACT CACCAGCCAG GTTCAGGGTA
AATGGAGTAG TTTTCAACGT TCCTGAGTTT TATAGGGCAT TTCCGAACGT AAATCCCTCG
GATAAACTCT ACAGACCAGA AAGTGAAAGA CCGGTGATCT GGTAA
|
|---|
| Protein sequence | MKKNGIISLF TFGILLVNTL TIVVLGSSET LRSNMSTSEK EKAFDPESMN LSIKPGDDFY
EYAEGDWIKN HPVPPDKSRY GEFAIVKDRN YDRVKEIMER AASNTSAPDG SLEQKIGRFY
SMGMNNATLE KQHLDSIKSE LKMIDNISNA SDLQTVSTQM MEYDLDTFFS MYAAPDKKNS
KIMIATLTQG GLGLPDRDFY FRQDNESIKI REQYLTHVTR MFVFLGDSPE IAENNARTVM
RIETRLANAS FTNVEDNDEV KTYNKMSLEE LQAFAPGINW SCLFVSLGHP DVAEVNVRNP
SYFKELSSAL QDENIDDWKT FLRWKLILGT SPYLSSDVEE EHFDFYGRKL NGQQEMKPRW
KRVIDAENEA MGEAVGRVYV DRYFDPGSRA RMQEMVLNLK TAFRERIQDL TWMEPETKKE
ALKKLEVLEV QVGYPDEWLN YSELEVKNDS YAMNVLRASK FKFHHGPSGL DRIGQPVNRK
LWEMNPQETN AYADYNKIII VFPAGILQPP FFNKDADDAV NYGAIGAIIG HEMTHHFDSQ
GRKFDASGNL TDWWTQEDAD NFNKSTEVLV DEYNRFEVLP GLYVNGNLTL PENVADFGGL
TVAYHAYKLS LKEEPDIIDG FTGDQRFFLG FTQVWRESDT NELLRTLVLT DTHSPARFRV
NGVVFNVPEF YRAFPNVNPS DKLYRPESER PVIW
|
|---|
| |