Gene Mbar_A2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2811 
Symbol 
ID3625196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3595138 
End bp3596337 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content46% 
IMG OID637701661 
Productpotassium channel protein 
Protein accessionYP_306291 
Protein GI73670276 
COG category[S] Function unknown 
COG ID[COG3273] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.775034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.031805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCTA AAGAATTCAG ATACAGTCCA AAGAACCTCA AGGATCTTTT GACTGAGATG 
AAGGATACTT CCGAACTCAT GGTAGACCTT GCATACTCTG CAATGATTTA CGATGATGAG
GATGTTGCAG AAGAGGTACT CAATCTTGAA GATAAGATGG ATACCCTCGA TTATCACATT
AAGATGGCCG CGATGTTAAG CACACGCAGG GTTGATGAGG CCGAAGGCCT CCTGGGAGTT
TTACAGGTTG CTGCGTGTTC GGAAAATATC GCTAACGCTG CAGGCGATAT TGCCAAGATA
GTTCTCATGA ACATGGGAAT TCCGATGGAA CTGAAAGTTG CTCTCAGGGA AGCGGAAGAG
ACCATAGTCA GGGCAACAGT TGCCGCAGAA TCTTCAATGT CAGGACGTAC GCTTGGCGAC
CTCGAACTTG ATATCGAGAC AGGCATGTGG ATTATTGCTA TCAGGAGAAA TGAGGACTGG
ATTTATGACC CTGACAAAGA AACTCGCCTC CGGCAGGGAG ATGTTTTGAT TGCCAGAGGT
CATGATGAAG GAGTCACGCT ATTTTTCGAG ATGGCCACAA CAAAGAAATT CGTACCAAAG
GAGATCGAGC ACGATAAGCT TTTGAAAGAC CTTGAGCATG CCGTGGATAT TATCGTGGAT
ATGAAGAATA TGTCCGAACT CTCGGTAGGG CTTGCATACT CTGCTATTCT TTTTGATAAC
GAAGATATAG CGTATGAGGT TAGTGCCCTG GAGTCCGAAA TGGACTCTAT GAAATATGAA
CTTCAGCACT GGGTGCTTGA AACCGCAAAG CATTTTGAGG ATGTGAACAT GCTCAGGGGA
ATCCTGCACC TTGCAAGTGC CTCTGAAGCT ATTTCCGACG CTGCCTACGG AATTGCGGAT
ACCGTACTCA GGGACATAGA ACTTCACCCC ATTATCACCC TTGCGGTCAG AAACTCCGAA
GAGGTTATAA CCAGGCTCCA GGTCGAGAAA TGTTCTCCTA TAGTCGGAAA GACTTTTTCT
GAATTGAAGC TTGAGACCGA AACCGGGCTG CACGTAATGG CAATCAAAAG GGCTGACCGC
TGGGTCTATG CTCCGAAAGG AAATACAGTT GTTCAGGCAG GAGATATGCT TATTGCACGC
GGCTCAAGGA TTGGAGAAGG GGCGCTTATA GAAATGTGTG AGTGTAAACT TAACCAGTAA
 
Protein sequence
MFPKEFRYSP KNLKDLLTEM KDTSELMVDL AYSAMIYDDE DVAEEVLNLE DKMDTLDYHI 
KMAAMLSTRR VDEAEGLLGV LQVAACSENI ANAAGDIAKI VLMNMGIPME LKVALREAEE
TIVRATVAAE SSMSGRTLGD LELDIETGMW IIAIRRNEDW IYDPDKETRL RQGDVLIARG
HDEGVTLFFE MATTKKFVPK EIEHDKLLKD LEHAVDIIVD MKNMSELSVG LAYSAILFDN
EDIAYEVSAL ESEMDSMKYE LQHWVLETAK HFEDVNMLRG ILHLASASEA ISDAAYGIAD
TVLRDIELHP IITLAVRNSE EVITRLQVEK CSPIVGKTFS ELKLETETGL HVMAIKRADR
WVYAPKGNTV VQAGDMLIAR GSRIGEGALI EMCECKLNQ