Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2804 |
Symbol | |
ID | 3625189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3583914 |
End bp | 3586763 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637701654 |
Product | DNA gyrase subunit A |
Protein accession | YP_306284 |
Protein GI | 73670269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.371561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000745999 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAT ATGAAGACGA GAAGAAACTC GAAGATGAAT TGAAAAAATC TTATCAGTCT ACCCTTCTCC CCGAAGAAAA AGATGAAGTA ATGGAAAATG GGGACGGTTC GGCCGCCCTT ACACAGGAAG ATTCGGGCAA AAGACTGGAA TTAAACGTAT CAGACCCTGC TTCAGATGAT CCAGAAGACA AAGGTATAGA GCCAGGTCAG AGTGGGGTTA CTTCCATCCT TATCGAAAAT GAGATGAAAC GCTCTTACAT CAACTATGCG ATGAGTGTGA TCGTTGGAAG AGCTCTTCCC GATGCAAGGG ATGGTTTCAA GCCAGTTCAC CGCAGGGTCC TTTTTGCTAT GAAAGAGGCA GGGATCACGC ATGATAAACC TTACAAGAAG TCAGCCCGTG TGGTGGGAGA TGTGCTCGGT AAATACCACC CTCACGGAGA TACTGCGGTC TATGACACTA TTGTGCGTAT GGTTCAGGAT TTCTCTCTTC GTTACCCTTT AATTGATGGG CAGGGAAACT TCGGGTCAAT AGATGGTGAC TCGGCTGCTG CCATGCGTTA CACTGAAGTC CGTATGGACA GAATCGCAGA AGAGATGCTG GTAGACATCG ACAAGGAAAC AGTTCCCTTC ATGCCAAATT ACGACGGGTC AATGGAAGAG CCCGAAGTCC TCCCTGCAAA ACTTCCGAAC CTTCTTGTCA ATGGATCCAC AGGTATTGCG GTAGGGATGG CAACTAACAT GGCACCTCAT AACATCGGAG AGGTCATTGA CGGCATTCTT ATGCTTATTG AAAATCCTGA CATCACAATT CCTGAGCTCA TGACCGTAAT CAAAGGCCCG GATTTTCCTA CAGGTGCTCA TATTCTTGGG ACGGCAGGCA TAAAATCGGC TTATATGACC GGAAGAGGTG CTTTAAAAAT TAGGGCAGTT GCCGAGATTC AGGAGTTTAA AAAAGACAGA CAGCGAATTA TCGTAACCGA ACTTCCTTAT CAGGTAAACA AAGCCAGGAT GATTGAAAAT ATTGCCCAGC TAGTTCGGGA AAAAACAATA ATGGGAATTT CCGACCTTCG TGACGAGTCT GACAGGGAAG GAATCAGGGT TGTTATCGAG CTTTCTCGAG GTACGAATCC AAAGGTTGTT TTAAATCAGC TTTATAAGCA CACTCAAATG GAAACCACTT TCGGGGTAAT CAATCTGGCT CTTGTTGACG GAAAACCAAA AGAGCTGAAC CTGAAGGAAC TTCTTGAGAT CTATCTTGAA TACAGGATGG AAATTATCCA GAAGCGGACA CTTTATGACC TCAGAAAGAG CGAGGAGAGA GCTCATATCC TTGATGGGCT CAAGATTGCT CTGGATAATA TAGACGAAGT CGTTGCTCTG ATAAAGGGCT CGGCAAATGC TGATGAAGCA AAGAAGGGCT TAATGGAGAA TTTTGCCCTT GACGAGATTC AGTCAAAGGC TATCCTTGAT ATGCGCCTGC AGCGCCTGAC AGGACTCGAA ACCAAGAAGG TGCTTGAGGA GCTGGAAGGG CTTGTAAAGC TGATAGGAGA ACTTAATAAA ATCATTGAGA GTGATGAACT CAAGTACGAA ATAATCAGGA ATGAACTTCT GGAGCTCAAG GAAAAGTATG GGGATGCTCG CAGGACTAAA ATCATGCAGG CTGCTTCTGA AGTCAGAGAA GAGGATCTTA TTCATGAAGA AGAAGTTGTT GTCACGATTA CTAATGGAGG CTACATAAAG CGCATCCCAC TCAAGACTTA CACCATGCAG CACCGTGGAG GCAGGGGTAT AATCGGCATG GAAATGAAGG AAGAAGACTT CGTGGAAAAT CTCTTCATTT CCTCAACCCA TAACTATATC CTTTTCTTCA CAAACCTCGG AAGGCTCTAC TGGGAAAAAG TATATGAGAT CCCTGAAGGC TCCCGGCAGT CCAGGGGCAA AGCCATAGTA AACCTTCTGG AGCTTAAGGG AGGCGAAACA ATTAATGCAA TGATTCCTGT CAAGGAGTTT GACAAAAACC ACTACCTTCT CATGGCAACA AGGGAAGGTA CTATTAAAAA GACTCCTCTC TCGGAGTTCA AGAACCCGAG GAAAGCAGGC ATAATTGCAG TCACCCTTGA TGAAGATGAC GAGCTTGTAA GAGTTCTCCT TACCGACGGG AAAAAAGAAG TCCTGATAGT TTCAAAGAAA GGCAAAGCTA TCCGTTTCTC TGAAAAAGAC GTCCGTCCGA TGGGCCGAAC TGCAAGAGGT GTACGGGGTA TGGCCCTTGA CGGCCCTGAA GACGAAGTTG TCAGTCTAGA CATCGTCGAT GAAACCACGA CCCTCCTGAC CGTAACTGAA AACGGCTTTG GCAAGAGAAC CGAGTACTCT CAGTACCCTG CGCACCGTCG CGGTGGAAAA GGCGTGATAA CAATCATTAC CAACGAGAGG AACGGCCCGG TCTCAAGAGT CCGGTCCGTA GCCGATGACG ATGAACTTAT CTTCACCAGT GCCGATGGTA TCATTATCCG CATTCCTGCG AAAGATATCT CGATCCAGGG CAGAAACACC CAGGGCGTAA GGATCATTAA TCTCAAATCC GGCGACAAAG TTGCAGGCAT AGCAAGAATT CAAAACGGGA AAGCCGAAAA GAACCTGAAA CTCACAGCTT TCAAAGGCAA AGAAGCCACA GAAGCAACTG GAGCCGGAGA GGAAGCCGAG GTTCCGGAGG GCGAAGCTGA AGATCTCAAT GAGTTTGACG AAGTAGAAGA CTTTGAAACT GCCGATGAAG CAGAAGAAAC TGAGGAAACC GAAGAAATAG AAGGGGATGA AGCAGAAGAG GACGACGTAG AAGAAATTGA AAAAGACTGA
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Protein sequence | MAKYEDEKKL EDELKKSYQS TLLPEEKDEV MENGDGSAAL TQEDSGKRLE LNVSDPASDD PEDKGIEPGQ SGVTSILIEN EMKRSYINYA MSVIVGRALP DARDGFKPVH RRVLFAMKEA GITHDKPYKK SARVVGDVLG KYHPHGDTAV YDTIVRMVQD FSLRYPLIDG QGNFGSIDGD SAAAMRYTEV RMDRIAEEML VDIDKETVPF MPNYDGSMEE PEVLPAKLPN LLVNGSTGIA VGMATNMAPH NIGEVIDGIL MLIENPDITI PELMTVIKGP DFPTGAHILG TAGIKSAYMT GRGALKIRAV AEIQEFKKDR QRIIVTELPY QVNKARMIEN IAQLVREKTI MGISDLRDES DREGIRVVIE LSRGTNPKVV LNQLYKHTQM ETTFGVINLA LVDGKPKELN LKELLEIYLE YRMEIIQKRT LYDLRKSEER AHILDGLKIA LDNIDEVVAL IKGSANADEA KKGLMENFAL DEIQSKAILD MRLQRLTGLE TKKVLEELEG LVKLIGELNK IIESDELKYE IIRNELLELK EKYGDARRTK IMQAASEVRE EDLIHEEEVV VTITNGGYIK RIPLKTYTMQ HRGGRGIIGM EMKEEDFVEN LFISSTHNYI LFFTNLGRLY WEKVYEIPEG SRQSRGKAIV NLLELKGGET INAMIPVKEF DKNHYLLMAT REGTIKKTPL SEFKNPRKAG IIAVTLDEDD ELVRVLLTDG KKEVLIVSKK GKAIRFSEKD VRPMGRTARG VRGMALDGPE DEVVSLDIVD ETTTLLTVTE NGFGKRTEYS QYPAHRRGGK GVITIITNER NGPVSRVRSV ADDDELIFTS ADGIIIRIPA KDISIQGRNT QGVRIINLKS GDKVAGIARI QNGKAEKNLK LTAFKGKEAT EATGAGEEAE VPEGEAEDLN EFDEVEDFET ADEAEETEET EEIEGDEAEE DDVEEIEKD
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