| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2801 |
|---|
| Symbol | |
|---|
| ID | 3625186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3578630 |
|---|
| End bp | 3579655 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637701651 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306281 |
|---|
| Protein GI | 73670266 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.79737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000289447 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCTT GTATCAAATT ACTTGAAACT TCAGTTAAAC GATACGAAGA ATCAAGAAAT
ATCTTCACCC CAAGAAGTTT AGACTATGCT CGTGCAACTA TGAACATGGG TGATGCATTA
CAAAAACTGG CTAATTTAGG AATTAATGAA AAAGATTATC TTGAAACTGC AGTCCGGTTG
TATGACGAAG CTAGAGAAAT TCTTTCTCCT ATAAGTTCAG ATTATGCACT TGTAACTATG
AATCAAGGAA ATGCCCTACA AAGATTAGCC GAATTACGTA TTTCTAATTT ACCTTATGTA
ATTAACAGTA AAACAGTTAA TGCAAAAATA TCGTTGCTTA CACCAGTAAA TTCAGTTTCA
TCGTCAATAG AATTAGATTT TGAAAAAGAA CGATCTCTCC AGTCTTTTCG TGATGAAATT
ATTTGTAAAT TAGATGTGCA AGACACAAAA ATAAATCGCA TTGAGGAGAG CGTATCTAAT
TCAAATAAGG TATTAAGTAA AATAAGTATA GATTGTAATT CAATAAAATC TCGAGTGGAG
AAAGGATTTG AAGGCAACGA AACAGAATTA AAAAAATTAC AACATCAGCT TGATTACGTT
AATTATAATC TCGAAGATTT GATGCAAATT TCGAATAAAG TCAGTGGTAA GGAAGCCGAA
TGTCTGAGAA AATTTATATC GCAGTTTTCC GAATTGACAA ATTCAGGAAA ATATGATATG
ATAAATGACT TCCTTGAAAA AATTATTCAA CATGAAACTT CACTCAAAGA AATAATAGAA
AAATCTGACC TTCCTGAGAA AGAGAAGCAA AATGCAAGAT CAAAAATCTC TAGTTTTAAA
AAGATACCTG GACTCATAAA GAAAAAAACT AAATCCTTCA GTGTAGATGT CACAAAAGAC
GTAGTAGTAA CTTTGACCTC TAATGAAATT ATAAAGTTAT TGGCACCAGT GCTAACAACA
GCAGCTTTTG GTGTGCCTAT ACCATCTAAG GTTGTGGAGA TACTTCTCGA AGCAATAGGA
AACTAG
|
|---|
| Protein sequence | MHSCIKLLET SVKRYEESRN IFTPRSLDYA RATMNMGDAL QKLANLGINE KDYLETAVRL
YDEAREILSP ISSDYALVTM NQGNALQRLA ELRISNLPYV INSKTVNAKI SLLTPVNSVS
SSIELDFEKE RSLQSFRDEI ICKLDVQDTK INRIEESVSN SNKVLSKISI DCNSIKSRVE
KGFEGNETEL KKLQHQLDYV NYNLEDLMQI SNKVSGKEAE CLRKFISQFS ELTNSGKYDM
INDFLEKIIQ HETSLKEIIE KSDLPEKEKQ NARSKISSFK KIPGLIKKKT KSFSVDVTKD
VVVTLTSNEI IKLLAPVLTT AAFGVPIPSK VVEILLEAIG N
|
|---|
| |