Gene Mbar_A2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2793 
Symbol 
ID3625121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3565091 
End bp3566815 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content41% 
IMG OID637701644 
Producthypothetical protein 
Protein accessionYP_306274 
Protein GI73670259 
COG category[S] Function unknown 
COG ID[COG1572] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.430464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000384805 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTTAA AGAGCAGTAA GTTGAACAGG TTTTTACTGT ATGCTGCAGG AACTTTAATC 
ATTTTTATGT ATGTTTCTCC TTGCCTGGCA ACTTACAATT TCGAAGGTAT TCCTGAACAG
GATGAATTGA TTGAAGCTAC ATCAGGGACG GTAAAAGGTG GGCTTTACGT TGATGGGGGT
GAGGGGCTTA AGGAGACTCC TTATGTGCAG GAATTCAATG TTCCGGGAGA TTCTGTAAAA
TGGGCCAGGG CATATGTGGG AGTCTGGGGC GGTACAGAAA AAAAAACTGG AACTCTGGAT
TTTACTGTCA ATGGGAAAGA TTTCGAAAGC GTGGATCTTG AAGGTGAAGC AGATAAGGGA
GATGATGAGG GTCAGAATCC CTCAATATAT TGTACTGGAC ATGGGGTATA CTGGGTAGCT
TATGACGTAA GCACGAATAT AAGTACCGGA CCTGTAAAAG TGGAAGTAAA AACTGAAGGG
GACATTGATG GCAGAATATA TGGTATAATC CTTGCTGCTG TATATGAAGA TAAAGACGGA
GAAGATACAA AGTACTGGAT AAAGGAAGGA AACCTGAATC TTCACGGCGA AGGATGGAGT
GGAGATCTGG CATCAACGCA TGATGAAGGA TATGCCGAAT TTTCGGGAAA TATAGATACT
GATAAGTACA AAACTGCAAC CCTTGCTGTA GCCTACCTAT GCGGCAGCCC AGGACTTGAA
GACTCTCTCT ACTTTAACGA TGAACAACTT TCGGATGGAG ATAACAAAAA CGATATTGCA
AATTCAAGAA GTTATTTTGA TCTAAAATTC TTTGATGTAC TGGACTTTCT TACGGAAGAT
GACAACGAAG TCAAGTTCCA AAGAGACGAT GAAGATTATG TCCATCCTGT ACTGGCCGCG
CTAACTTTGG GAACGGAAGA AGCTGGAAGC TCTTCTGACC TTATAGTCTC CAGACTTACT
TTACCTGTGC TCTGCGCAGG TGAAGATAAT GTCATCAAGG CAAACATTAA AAATATCGGA
AAAGACTCAG CAAGTAGTTT TCAGGCAGCA CTTTATGCTG ATGATGAAGT CGTATCCACT
GCTACCGTAT CTTCTCTTGC TAGTGAAAAA AATAAAACTA TAGAGTTTAA CTGGAAACCT
GCCAGTGACG GACAGAGGGC TCTAAAAGTA TATGTCGACT ACGTAAACAA AATAAAAGAA
AAATGTGAAG TAAATAATTA CAACGTTCCT GTTCTTGCTA AGGTTATCGA TATAACTCCA
CCCGAGATTG AAATAAAATC ACCGGAAGAC GGAAGTTTCG TAGATGCTGG AGAGATAACT
GTAAGCGGAA CGGTTGAAGA CACAAGTCGA AACTTAACAG TGGATGTGAA CGGAAAGAAA
GCACTGCTTT CAGGTGGGAG CTGGAGCGCA AAAGTTCCTT TAGCTTCAGG GCCTAATGTA
ATAGCTGTTT GCGCGATGGA CAGAGCAAAT AACACAGCAA AAGAAGTTAT TGTTCTCAAC
CGAAAAGCTT CTTTCCTGCG TGACTTTAAT GAATCTTCCA GGTCTATGAA TCAAAATAAC
ACAAAATCTG CCAATGAAAC ATTTCAGATT TCCCGGCATA AAGACCTGTC ACAAAATAGA
ATATATCTAT TTTTCAAAAA ATTGATTTCT AATTGGTGGG ACGAGGTTGA AAATCGAAGC
ATACAATCGG AACCTTTACA TAGATTATTC TATGACGGAT CCTAA
 
Protein sequence
MLLKSSKLNR FLLYAAGTLI IFMYVSPCLA TYNFEGIPEQ DELIEATSGT VKGGLYVDGG 
EGLKETPYVQ EFNVPGDSVK WARAYVGVWG GTEKKTGTLD FTVNGKDFES VDLEGEADKG
DDEGQNPSIY CTGHGVYWVA YDVSTNISTG PVKVEVKTEG DIDGRIYGII LAAVYEDKDG
EDTKYWIKEG NLNLHGEGWS GDLASTHDEG YAEFSGNIDT DKYKTATLAV AYLCGSPGLE
DSLYFNDEQL SDGDNKNDIA NSRSYFDLKF FDVLDFLTED DNEVKFQRDD EDYVHPVLAA
LTLGTEEAGS SSDLIVSRLT LPVLCAGEDN VIKANIKNIG KDSASSFQAA LYADDEVVST
ATVSSLASEK NKTIEFNWKP ASDGQRALKV YVDYVNKIKE KCEVNNYNVP VLAKVIDITP
PEIEIKSPED GSFVDAGEIT VSGTVEDTSR NLTVDVNGKK ALLSGGSWSA KVPLASGPNV
IAVCAMDRAN NTAKEVIVLN RKASFLRDFN ESSRSMNQNN TKSANETFQI SRHKDLSQNR
IYLFFKKLIS NWWDEVENRS IQSEPLHRLF YDGS