Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2792 |
Symbol | |
ID | 3625120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3563792 |
End bp | 3564991 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637701643 |
Product | hypothetical protein |
Protein accession | YP_306273 |
Protein GI | 73670258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0164473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000911895 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAGAA AAAGTAATTT CTATATAACT GCGGTTTTTT TAATCATTAT TTACACGCTC ATATATATTA TGCCTGCTGC GGCAAATGAA GATGACTGGA ACAGCCTTAC CGTTACCCTC GGAAATGAAA ATTCAATAGT AAGCATAGTT TCTGTTGATG AATACACTAT TGAAGCACTG AATTTTGATG GTTATGGCAT GGTATGGCTT CGAGTCTCGA AAAACGGTTT GGCTCTTGGA GATACTGTCC TGGAAAATAA CAGTTCAAGC TGGTGTTATA TGGACAACGA CAATATACGG CTTAAGGCTT TCAACGTCAC CAATAAGGAA AGTCTTCCTA TGTTTTCTAA TCTTTGTTCA CCTGAAGCAG AAGTAGTTTT TGAAGCAAAA AGGCCTAAAG AAGAATCATC TGCCGAAGAT AATGTGCATC TGGAACTTGA TTTGGAAGCT GACAAAGATG AGTACCTGCT TGGTGATGAA GTAATTGTTG ATACGGAAAT TCGAAATATA GGGAAAATTA AAGCAGATAA GGTAAAATTT GATTTTGACT CCGATGGGCT TCTAGTTCAT GAAGGGGGTC CTGAGAATAT ATCGATTGAT AAAGGTTCAA AAAAGTCTTT TGAACTTCGG TTCAGGTTTC CAGAAAAAAT AAAAGAGAAT TATAATATAA CTGCAAATGT GAGTTGGGAA GATAATTCCG GCAAACATTT CCTTTCAAAA GTTGTAGAAA TTTCAGTCAG CGAGCCTCTG GAAATATATA AAAACACTGG GTCCGAAGTT TTTATAGGGA CTCCTGCATA TGTTACGGTT TCCGTTAAAA ACGTTCAAGA CAGACCTGCA AATATCTCAT TAATCGACCT GTTGCCAGCA ACATTTACAA TAATTAACAA CTCCAAACTG GCTGCTAGTG TCCTGGGTCT GGATAGTTCG CCTTATTTGA GCCAGGATTT TGTGCTGGCC CCGGAAGAAA TGAAAACATT TTCTTACTCG ATCAAATCCG AAAAAACCGG AGCACACAGA GTACCGCAAA CTCATGCATA CGCAAATTTA TGCGGACAAC TATACAACGA ATATTCAGAT TCCGAAAATA TAATTACAGT ATATGATAAT ATTTCATACA AAGAATATAA TCAGGAGACT CAAGTAGAAA AAATACCTCC TGTAGAAACA AAATTGCACG TTGAGCTGGT TCCTGCATAA
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Protein sequence | MNRKSNFYIT AVFLIIIYTL IYIMPAAANE DDWNSLTVTL GNENSIVSIV SVDEYTIEAL NFDGYGMVWL RVSKNGLALG DTVLENNSSS WCYMDNDNIR LKAFNVTNKE SLPMFSNLCS PEAEVVFEAK RPKEESSAED NVHLELDLEA DKDEYLLGDE VIVDTEIRNI GKIKADKVKF DFDSDGLLVH EGGPENISID KGSKKSFELR FRFPEKIKEN YNITANVSWE DNSGKHFLSK VVEISVSEPL EIYKNTGSEV FIGTPAYVTV SVKNVQDRPA NISLIDLLPA TFTIINNSKL AASVLGLDSS PYLSQDFVLA PEEMKTFSYS IKSEKTGAHR VPQTHAYANL CGQLYNEYSD SENIITVYDN ISYKEYNQET QVEKIPPVET KLHVELVPA
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