Gene Mbar_A2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2792 
Symbol 
ID3625120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3563792 
End bp3564991 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content37% 
IMG OID637701643 
Producthypothetical protein 
Protein accessionYP_306273 
Protein GI73670258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0164473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000911895 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGAA AAAGTAATTT CTATATAACT GCGGTTTTTT TAATCATTAT TTACACGCTC 
ATATATATTA TGCCTGCTGC GGCAAATGAA GATGACTGGA ACAGCCTTAC CGTTACCCTC
GGAAATGAAA ATTCAATAGT AAGCATAGTT TCTGTTGATG AATACACTAT TGAAGCACTG
AATTTTGATG GTTATGGCAT GGTATGGCTT CGAGTCTCGA AAAACGGTTT GGCTCTTGGA
GATACTGTCC TGGAAAATAA CAGTTCAAGC TGGTGTTATA TGGACAACGA CAATATACGG
CTTAAGGCTT TCAACGTCAC CAATAAGGAA AGTCTTCCTA TGTTTTCTAA TCTTTGTTCA
CCTGAAGCAG AAGTAGTTTT TGAAGCAAAA AGGCCTAAAG AAGAATCATC TGCCGAAGAT
AATGTGCATC TGGAACTTGA TTTGGAAGCT GACAAAGATG AGTACCTGCT TGGTGATGAA
GTAATTGTTG ATACGGAAAT TCGAAATATA GGGAAAATTA AAGCAGATAA GGTAAAATTT
GATTTTGACT CCGATGGGCT TCTAGTTCAT GAAGGGGGTC CTGAGAATAT ATCGATTGAT
AAAGGTTCAA AAAAGTCTTT TGAACTTCGG TTCAGGTTTC CAGAAAAAAT AAAAGAGAAT
TATAATATAA CTGCAAATGT GAGTTGGGAA GATAATTCCG GCAAACATTT CCTTTCAAAA
GTTGTAGAAA TTTCAGTCAG CGAGCCTCTG GAAATATATA AAAACACTGG GTCCGAAGTT
TTTATAGGGA CTCCTGCATA TGTTACGGTT TCCGTTAAAA ACGTTCAAGA CAGACCTGCA
AATATCTCAT TAATCGACCT GTTGCCAGCA ACATTTACAA TAATTAACAA CTCCAAACTG
GCTGCTAGTG TCCTGGGTCT GGATAGTTCG CCTTATTTGA GCCAGGATTT TGTGCTGGCC
CCGGAAGAAA TGAAAACATT TTCTTACTCG ATCAAATCCG AAAAAACCGG AGCACACAGA
GTACCGCAAA CTCATGCATA CGCAAATTTA TGCGGACAAC TATACAACGA ATATTCAGAT
TCCGAAAATA TAATTACAGT ATATGATAAT ATTTCATACA AAGAATATAA TCAGGAGACT
CAAGTAGAAA AAATACCTCC TGTAGAAACA AAATTGCACG TTGAGCTGGT TCCTGCATAA
 
Protein sequence
MNRKSNFYIT AVFLIIIYTL IYIMPAAANE DDWNSLTVTL GNENSIVSIV SVDEYTIEAL 
NFDGYGMVWL RVSKNGLALG DTVLENNSSS WCYMDNDNIR LKAFNVTNKE SLPMFSNLCS
PEAEVVFEAK RPKEESSAED NVHLELDLEA DKDEYLLGDE VIVDTEIRNI GKIKADKVKF
DFDSDGLLVH EGGPENISID KGSKKSFELR FRFPEKIKEN YNITANVSWE DNSGKHFLSK
VVEISVSEPL EIYKNTGSEV FIGTPAYVTV SVKNVQDRPA NISLIDLLPA TFTIINNSKL
AASVLGLDSS PYLSQDFVLA PEEMKTFSYS IKSEKTGAHR VPQTHAYANL CGQLYNEYSD
SENIITVYDN ISYKEYNQET QVEKIPPVET KLHVELVPA