Gene Mbar_A2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2780 
Symbol 
ID3625108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3534688 
End bp3535593 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content40% 
IMG OID637701631 
Producthypothetical protein 
Protein accessionYP_306261 
Protein GI73670246 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0383383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGACG GAAACACAAG CAGGGAGCAA CTTTTAGAAA CTCTCAGGTC GGTTGATACG 
CAAACCCTCA TAACTATGGC TCTTATTGTA TTAATTGCAT ATGTTCTTGG CAGGGTCATT
ACCATTCTCT TATTAAAACT TTCAGAAAAA TTGAGCCATA CTGGTAGAAT AAAAGTAGAA
CTAGTTATCC CGATCATAAA ATTTGTAATC TACCTCATAG CTTTTTATTT CATCTTTAGA
GAAATATTCA AAATTTTCGG ACCGGAAATC TTTCTCCTTG CTGGACTTCT AGGTGCAGCC
ATTGGATTTG GGCTTAAAGA CCTTTTTTCA GATATCGTCG GAGGGCTGGT AATTACATTT
GAAAAACCTT ACCAGATAGG GGATAAAATT TCAATTGGGA ACTATTTTGG CGAAGTCACT
GATATAGGTC TAAGGGCAAC GAAACTGTTC ACACCTGATG CCAATGTCGT TACGGCCCCA
AATAGCCTGA TTTTCAAAGA AACCGTTGCC AGTGCAAATT ATGGGGTCTC GGAAATGATG
GTTGTAATAG ACCTGTATAT TGCAGGAGAG TCACATGTAG AAACTGCAAT GAGGATTTTA
TGGGAAGCAG TTGTGAGCTC TAAATATGTT TATATCTCCA AAGAAAAGCC TGTTATTCTG
CTGCATAAAG CCCTTCCATT CTACACGAGG TTAAGGGCCA AAGCTTATGT CAATGACCTT
AGAGACCAGT TCAAGTTTGA ATCAGATGTT CACACAAGGG CCTGGGTAGA ATTCCAGAAG
AAGGGGATCA TGGCTCCCCA GCTCCATATC TTGAATATTC CTTCAATAGA AGAAAAGTAT
GAATCAGACG CTACAACTCG GAGAAATCTG GGGGCAAATG TAAGAGGTCT TAAAGATTCC
AAATAA
 
Protein sequence
MVDGNTSREQ LLETLRSVDT QTLITMALIV LIAYVLGRVI TILLLKLSEK LSHTGRIKVE 
LVIPIIKFVI YLIAFYFIFR EIFKIFGPEI FLLAGLLGAA IGFGLKDLFS DIVGGLVITF
EKPYQIGDKI SIGNYFGEVT DIGLRATKLF TPDANVVTAP NSLIFKETVA SANYGVSEMM
VVIDLYIAGE SHVETAMRIL WEAVVSSKYV YISKEKPVIL LHKALPFYTR LRAKAYVNDL
RDQFKFESDV HTRAWVEFQK KGIMAPQLHI LNIPSIEEKY ESDATTRRNL GANVRGLKDS
K