Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2780 |
Symbol | |
ID | 3625108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3534688 |
End bp | 3535593 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701631 |
Product | hypothetical protein |
Protein accession | YP_306261 |
Protein GI | 73670246 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.188886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0383383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGACG GAAACACAAG CAGGGAGCAA CTTTTAGAAA CTCTCAGGTC GGTTGATACG CAAACCCTCA TAACTATGGC TCTTATTGTA TTAATTGCAT ATGTTCTTGG CAGGGTCATT ACCATTCTCT TATTAAAACT TTCAGAAAAA TTGAGCCATA CTGGTAGAAT AAAAGTAGAA CTAGTTATCC CGATCATAAA ATTTGTAATC TACCTCATAG CTTTTTATTT CATCTTTAGA GAAATATTCA AAATTTTCGG ACCGGAAATC TTTCTCCTTG CTGGACTTCT AGGTGCAGCC ATTGGATTTG GGCTTAAAGA CCTTTTTTCA GATATCGTCG GAGGGCTGGT AATTACATTT GAAAAACCTT ACCAGATAGG GGATAAAATT TCAATTGGGA ACTATTTTGG CGAAGTCACT GATATAGGTC TAAGGGCAAC GAAACTGTTC ACACCTGATG CCAATGTCGT TACGGCCCCA AATAGCCTGA TTTTCAAAGA AACCGTTGCC AGTGCAAATT ATGGGGTCTC GGAAATGATG GTTGTAATAG ACCTGTATAT TGCAGGAGAG TCACATGTAG AAACTGCAAT GAGGATTTTA TGGGAAGCAG TTGTGAGCTC TAAATATGTT TATATCTCCA AAGAAAAGCC TGTTATTCTG CTGCATAAAG CCCTTCCATT CTACACGAGG TTAAGGGCCA AAGCTTATGT CAATGACCTT AGAGACCAGT TCAAGTTTGA ATCAGATGTT CACACAAGGG CCTGGGTAGA ATTCCAGAAG AAGGGGATCA TGGCTCCCCA GCTCCATATC TTGAATATTC CTTCAATAGA AGAAAAGTAT GAATCAGACG CTACAACTCG GAGAAATCTG GGGGCAAATG TAAGAGGTCT TAAAGATTCC AAATAA
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Protein sequence | MVDGNTSREQ LLETLRSVDT QTLITMALIV LIAYVLGRVI TILLLKLSEK LSHTGRIKVE LVIPIIKFVI YLIAFYFIFR EIFKIFGPEI FLLAGLLGAA IGFGLKDLFS DIVGGLVITF EKPYQIGDKI SIGNYFGEVT DIGLRATKLF TPDANVVTAP NSLIFKETVA SANYGVSEMM VVIDLYIAGE SHVETAMRIL WEAVVSSKYV YISKEKPVIL LHKALPFYTR LRAKAYVNDL RDQFKFESDV HTRAWVEFQK KGIMAPQLHI LNIPSIEEKY ESDATTRRNL GANVRGLKDS K
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