| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2771 |
|---|
| Symbol | |
|---|
| ID | 3625099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3520722 |
|---|
| End bp | 3521867 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637701623 |
|---|
| Product | L-sorbosone dehydrogenase |
|---|
| Protein accession | YP_306253 |
|---|
| Protein GI | 73670238 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.069543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0541194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAA CAAGAGTAAT ACTTGGTTTT TTTGCAATCA TTGCACTTAT CTTTGTAGCT
TATGCGGTTC TCAGAACCAT ACCACTTAAT GATTGCGGAG ATAACGGGAC AGGACTTAAC
TGTATCGAGC TTCCACCCGG TTTTTCCATT GATTATTATG CTGAGAATAT TGAGGGTGCA
AGGTCAATGG CGCTTAGCCC TAATGGCACT ATCTTTGTCG GAAGCCGGGA TACAGGGAAA
GTTTATGCAG TTCTTGACCG GAACAATGAT AGTAAAGCCG ACGAGGTTCT TGTGCTTGCT
GAGGGCCTAG ACATGCCAAA CGGGGTGGCG TTCAGGAACG GTTCGCTATA TGTCGCTGAG
GTCTCCAGGG TGATCCGCTA TGATGACATC GAAGCAAGGC TTGAAAATCC GCCTGAACCT
ATTGTAGTGA ACGATAATTT CCCGTCCGAT CGCTCACACG GCTGGAAATA TATCAAATTC
GGGCCTGACG GAAAGCTGTA TGTGCCTGTA GGAATGCCGT GCAATGTTTG TAATAAGGAG
GGAGAGGACG AAAGGTACGG AACAATCATG AGAATGGAAC CTGATGGAAG CCAGCTTGAG
ATTTTTGCAA AGGGTGTCAG GAACAGTGTC GGGTTTGACT GGAATCCCAG GACCGGAGAA
TTATGGTTTA CTGACAACGG AAGGGACTGG CTTGGAGATG ATGAGCCTCC GGATGAACTT
AATAGGGCGC CTGTAAAGGG AATGCATTTC GGTTTTCCTT ATTGCCACGG TGGAGATATT
CCAGATCCTG AATACGGGAA ACTCAGGAAC TGCTCAGAAT TCACACCTCC TGAAATGAAG
CTGGGGCCTC ATGTGGCTGC CCTTGGAATG ACTTTTTACA CAGGTACAAT GTTTCCTGAA
GAGTACAGAA ACCAGATCTT CATTGCAGAA CACGGCTCCT GGAACAGAAA AATTCCAATT
GGATACCGGG TTTCTCTTGT CAGGCTGGAG AACGGAAAGC CTGTAAGTTA CGAACCTTTT
GCTAATGGCT GGCTTCAGGG ACTTGCGGCC TGGGGAAGGC CTGTGGATGT TCTTGTGATG
CCTGATGGGG CACTGCTTGT TTCGGATGAC AAAAATAATG CAATCTACAG GATCAGCTAC
AGCTGA
|
|---|
| Protein sequence | MKGTRVILGF FAIIALIFVA YAVLRTIPLN DCGDNGTGLN CIELPPGFSI DYYAENIEGA
RSMALSPNGT IFVGSRDTGK VYAVLDRNND SKADEVLVLA EGLDMPNGVA FRNGSLYVAE
VSRVIRYDDI EARLENPPEP IVVNDNFPSD RSHGWKYIKF GPDGKLYVPV GMPCNVCNKE
GEDERYGTIM RMEPDGSQLE IFAKGVRNSV GFDWNPRTGE LWFTDNGRDW LGDDEPPDEL
NRAPVKGMHF GFPYCHGGDI PDPEYGKLRN CSEFTPPEMK LGPHVAALGM TFYTGTMFPE
EYRNQIFIAE HGSWNRKIPI GYRVSLVRLE NGKPVSYEPF ANGWLQGLAA WGRPVDVLVM
PDGALLVSDD KNNAIYRISY S
|
|---|
| |