Gene Mbar_A2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2750 
Symbol 
ID3624994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3494945 
End bp3495571 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content42% 
IMG OID637701603 
Producthypothetical protein 
Protein accessionYP_306233 
Protein GI73670218 
COG category[S] Function unknown 
COG ID[COG4127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.216943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00281917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTCT GGTTGCTCAA AGCTGCAGGC ACCCTGGAAG ACGAAGAACT GATTCTGGAA 
AACAGTGTAA TTACAATAGG ATGGGCTGAA TTCCCGGATT TGTCAGGTGT TAGAAATGAG
GTACAGGTAA AGAAAATAAT GCTCGAGAAA TATCCCGGGA TGCAGGAAGA GCGTAGTTCT
GCCTGGACAG GAGAGATATA CTCATTTATC ACAAAAATAA AGAAAGGAGA CCTTGTGGCA
GTACCGCTCA AAACCAGGAA CGAGATGCTG ATTGGAAAAG TTACCGGAGA CTATGAGTAT
CGGCAGATCA GTGATTTTAT CAGACATATC AGGAGTGTGA GTTGGTCTAA AACGATCCCG
AAGGGAGATT TCGAGGAAGA ATATGATGTT GACCTCAGTA CTCCTGAAGC ACTTTCCCTT
ATAGAAGCAG ACCCTGAAAA ATTTTCAGAG ACAACTGAGA TAAAAAACCT GGGAGTCCTT
CTTGAAGAGC TTAACTTTAC TTTTAATGAA CTTGGCTCTC TGAAAGAAAG GCTGCTTGAA
CTTACTTACA GGCTAGCTGA GACTGAAGAG ATTTCCGAAG TCCGAAAAAT CGCAGCTGAA
ATGGAGAAAA TGCTGAAAGA AAAGTGA
 
Protein sequence
MKFWLLKAAG TLEDEELILE NSVITIGWAE FPDLSGVRNE VQVKKIMLEK YPGMQEERSS 
AWTGEIYSFI TKIKKGDLVA VPLKTRNEML IGKVTGDYEY RQISDFIRHI RSVSWSKTIP
KGDFEEEYDV DLSTPEALSL IEADPEKFSE TTEIKNLGVL LEELNFTFNE LGSLKERLLE
LTYRLAETEE ISEVRKIAAE MEKMLKEK