Gene Mbar_A2740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2740 
Symbol 
ID3624504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3481447 
End bp3482139 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content41% 
IMG OID637701593 
ProductTetR family transcriptional regulator 
Protein accessionYP_306223 
Protein GI73670208 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0291953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000390237 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCGAAGA TATTGCCCGA GTATAGGGAA AAGGCAAAAA AAAGAATTAT TGAAGCAGGG 
CTGGAGGTAA TGTATGAGAA AGGATACTGT AACACTACAA TGGAAGATAT CGCTCGCTGC
CTTGATGTCA GCAAACCGGC CCTCTATCGA TACTTTAAAA ATAAGGATGA ATTAGTCATA
GAAAGCGCAA ATTATCTGCA GACACAGTAC CGTGATATAA AAACAGGCTG TAATTCTGAG
TACCGTGATA TAAAAACAGG CTGTAATTCT GACATCTGCC CTGTTGATGC GTGGATAGAA
ATCTTCGATC AGATAATGTC ACCTGATATT AAAATACATG CATTATATTT TGAAATTCTG
GGGATGACAG TACACAAACC TGAGGTCCAG AAAAGATCAA TCGAAGGCAT GAAGCGTGGT
CTTGACCAGC CAACTCATGA AATTGAAGAA CAACAGCAGA AAGGCCTTAT TCCATCCAAA
ACCGATCCGC GTACCCTTGC AATCGCTCTT GTGTCATTGT TTAATGGAAT GCGGGTTCTT
ATCCTTCTTG GCGTTGATTG GAAAGAAGTC CGCTCTCGAT GGATCGAAAT ACTCCGAAAT
TTATTTGGAA TAACAGAAAA AGGAGGGCAG CAGGCAGAAT GCCCCAGGGA TTGTAAAAGG
TTTGAGGATT GTAATCCTGC ATCAGAAATA TGA
 
Protein sequence
MSKILPEYRE KAKKRIIEAG LEVMYEKGYC NTTMEDIARC LDVSKPALYR YFKNKDELVI 
ESANYLQTQY RDIKTGCNSE YRDIKTGCNS DICPVDAWIE IFDQIMSPDI KIHALYFEIL
GMTVHKPEVQ KRSIEGMKRG LDQPTHEIEE QQQKGLIPSK TDPRTLAIAL VSLFNGMRVL
ILLGVDWKEV RSRWIEILRN LFGITEKGGQ QAECPRDCKR FEDCNPASEI