Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2735 |
Symbol | |
ID | 3624499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3474129 |
End bp | 3475412 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637701588 |
Product | putative iron complex transport system substrate-binding protein |
Protein accession | YP_306218 |
Protein GI | 73670203 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0180927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000609348 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATACAA CTGTAAAAAG AAAGTTATTT GTAGGTATCT TATTGTGCTT CTTAATGTCT TTGAGAATAT GTGTGGCTAG TGCAGCAATT CCAGGGGATC TGAATAATGA TAACATGATC TCTAGAGCAG AACTTTCAGA TGCAATTATC TCATACATGA AGTTTACATA TACCGGAGAA AATGTGAAGT GTCTTGAAAA GGATATGTTG CGAGAAACCG CAAGAAAGCA TTTTACAATA ACTGTGACTG ATCTTGCTGG AAGAGAAGTT ACTGTTCCTA CAAGAGTCGA AAGAGTTGTT TTAGGTCAGT CTCTTTATAT TCAGGAATTT GCCGCTCTAG AAGGTGAAAA TTTTACAGAA AAAATAGTTG GTTGGGGTTC AGAACTTGAA ACTTATGACA TAGATACCTA CAATGAATAT CTAAATAAGT ACCCTGAAAT AGAAAACATT CCTGCAGTCG GATCTCTTAA TAAAAATACA TTTGATACAG AAGCTATTAT TTCTCTTAAT CCTGACCTTG TTATAATGCC ATTAATGATG AAAGAGATCG CACAAAAGAG TACTGAAAAT CTGGAAAATG CCGGAATTCC CGTTCTTTTT GTAGATTTCT GGAAAGACCC TTTAGAAAAT ACACAGAAGA GCATACTAGT AATGGGTCAA GTACTGGGTA GGGAAAAAAG AGCAGAAGAT ATTTCTAGAT TTTACGGGGA ACAGATGGAT AAGGTTTATT CAGTCCTGAA TAGCGAGGAA GAAAATGATA CAAAACAGAA AGTTTACGTT GAATATGGTT CATTTGGCCC ATCTCAGTAT GGAATGACTT TTAGTACCTC AAACTGGGGA CCAATGATCA CAAAATTAAA TGGTATAAAC GTTGCCGAAG GTGTTGCAAG TATGGCTCCC ATAGATCCGG AATACCTTCT GGCTGAAAAT CCTGATATCA TAATAATAGC TGGCCAGTAC TGGCCAGAGA GTAAAGATTC AATGATACTT GGATATGCAA CAAATCTAAA TGAATCCAGA AAACGTCTTC AAGGTTTCTG TACCCGCTCA GGATGGAACA CACTTAATGC AGTAAAAAAT AATAATATTC ATGGGATTCA TCAAGGTATT AGTTATCATA TATATAATTT TGCGGGAATT CAGGCACTTG CTAAATGGAT GTATCCAGAG AAATTTGCTG ATTTAGATCC GGAAGCAAAT TTAAGAGAAT TTCATGAGAG ATATCTGCCT ATTGATTATA ATGGTGTGTG GATCTTGGAT ATTGGGGAGG CGCAAGAGAA ATGA
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Protein sequence | MNTTVKRKLF VGILLCFLMS LRICVASAAI PGDLNNDNMI SRAELSDAII SYMKFTYTGE NVKCLEKDML RETARKHFTI TVTDLAGREV TVPTRVERVV LGQSLYIQEF AALEGENFTE KIVGWGSELE TYDIDTYNEY LNKYPEIENI PAVGSLNKNT FDTEAIISLN PDLVIMPLMM KEIAQKSTEN LENAGIPVLF VDFWKDPLEN TQKSILVMGQ VLGREKRAED ISRFYGEQMD KVYSVLNSEE ENDTKQKVYV EYGSFGPSQY GMTFSTSNWG PMITKLNGIN VAEGVASMAP IDPEYLLAEN PDIIIIAGQY WPESKDSMIL GYATNLNESR KRLQGFCTRS GWNTLNAVKN NNIHGIHQGI SYHIYNFAGI QALAKWMYPE KFADLDPEAN LREFHERYLP IDYNGVWILD IGEAQEK
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