Gene Mbar_A2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2734 
Symbol 
ID3624498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3473089 
End bp3474132 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content36% 
IMG OID637701587 
ProductFe(III) dicitrate ABC transporter, permease 
Protein accessionYP_306217 
Protein GI73670202 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000167037 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000165993 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCTG CAAACAGAGA TACATATAAT ACTATAATAA AGCAAAAATC TCTTTATTTC 
ATTTGTTTTG CAATTGCAGT ATTCCTTGCA TTTTTAACAG ATATTGCAGT AGGATCTTCA
TCACTTTCTG TTTATGACGT CTTTTCAACA ATAATTTCAC CACATTTAAA CGATCCTAAT
ACAACTGTCA TTGTCTGGGA TTTTAGATTA CCTAAAGCTC TGATGGCAAT TATTGTCGGT
GCATCTCTCG CTGTAGCTGG CGCGGAAGTA CAAACTATTC TTGATAATCC TCTGGCGAGC
CCGTACACAC TCGGCATATC AGCTGCTGCT GGCTTTGGTG CTGCTCTTGC TGTAGTTTTC
GGACTAGGCA CAATCCCTTT TGCTGGAAGT ATCCTTGTTT CTATTAATGC TTTTATTTTT
TCATTTATCT CATTTTCTAT AATATGCCTT ATCGCTAAAA TAAAAAATGC CAGCAAAGAG
ATTATGATTC TTACTGGAGT CTCCCTATTA TTTTTGTTCC AGGCACTAAT ATCTTTACTT
GAATATTTAG CAACAGATGA GCAGCTTCAA AAAATAGTAT TTTGGTTATT TGGCAGTTTC
GAGAACTCCT CCTGGTCTAC AGTATTAATT TGTTTTGTTA TATTTATTAT CATCGTTCCA
TTACTTGCCA TTAATTCTTG GAAACTTACA GCACTAAAAC TGGGAGACGA GAAGGCCAAA
AGTTTAGGAA TTAACGTTGA AAAACTACGC TTAAAAGTGA TCATTTGCGT AACTATCCTT
ACAGCATCTG CTGTATGTTT TGTTGGTACA ATAGGTTTTG TAGGTCTCGT TCCACCTCAT
ATAGCTCGAA TTCTTACAGG TGAAGATCAG AGGTACTTCA TACCTTTGTC TGCACTTTTA
GGGTCGCTTT TTCTATCTTT GGCTTCGATT GGCGGGAAGA TAGTTTGTCA CAAAGGTGTA
TTCCCTATAG GAATTGCCAC TTCTATGATA GGTGTTCCTT TCTTTTTATC GTTAATTATA
ATGAAAAGGA GCGAGTCCTT TTGA
 
Protein sequence
MKSANRDTYN TIIKQKSLYF ICFAIAVFLA FLTDIAVGSS SLSVYDVFST IISPHLNDPN 
TTVIVWDFRL PKALMAIIVG ASLAVAGAEV QTILDNPLAS PYTLGISAAA GFGAALAVVF
GLGTIPFAGS ILVSINAFIF SFISFSIICL IAKIKNASKE IMILTGVSLL FLFQALISLL
EYLATDEQLQ KIVFWLFGSF ENSSWSTVLI CFVIFIIIVP LLAINSWKLT ALKLGDEKAK
SLGINVEKLR LKVIICVTIL TASAVCFVGT IGFVGLVPPH IARILTGEDQ RYFIPLSALL
GSLFLSLASI GGKIVCHKGV FPIGIATSMI GVPFFLSLII MKRSESF