Gene Mbar_A2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2728 
Symbol 
ID3624492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3464665 
End bp3466065 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content40% 
IMG OID637701581 
Producthypothetical protein 
Protein accessionYP_306211 
Protein GI73670196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.183728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000609348 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAAAA GTACAGCATT GAAGGCAGCA TCCCAGTTTT TTAGTTTATT GTTTTGCCTG 
ATATTGTTAC CGGCTGCGTT TGCTCAGCCA GAAGAGCTTA ATGGAACAGT TATCTACGAA
AATGGAACTT ATGAAAGGAA TATAGTTCCT GGACTGGAAG AAATTTACGG GAATTACACC
GTACATGATA TAAAACCAGA TTACTATTCG GTAGATCTCA TGCCGGGAGA ATATGAAACT
TTCAACGTTA GTTTCAGGAA CGAAGGTAAC GAAAACCTCG ACATAGCTCC GAAAGTTGCA
GCTCCATCTA ACGATTACTA TGATGTTGTA AACGAAAGCT GGATTACGAT TTTACCTGAA
AATGTAACGT TAAGCCCTGG TGTAGAGCAG AATTTTACCA TTGAGGTAAG TGTTCCTGAG
GATGCGGAAA GTGGGGAGTA TGAAGCCCAG GTAGCTTTCA CAAATGATAC CTATCCAGAA
AAATATGATA CTCCTGTATA TATTCAGGAA CCTGCTGAAG GATATGATGA TTATCTATAT
ACTGAAGGAT ATGATGATTA TCTATATACT GAAGGATATG ATGATTATCT ATATACTGAA
GGATATAGTG ATCCTATGTA TGTCAATGCA ATGCAACTTT GGGTCTCAGT GCCTGTCCGT
CCGAAGCTTG AGCTTCAGAC AAGTTATGTT TCTGACACCG TTGAGCCTGG AAAGGAATAT
ATATACGTTA TAAAAATTAA AAACGTGGCA GGCAAAGATG TTACTATCGA TCCGAAGTTA
ATGAAATACG AGATATATGA CTATTCATTT GACGAACCAT CTTTTAGTGA TGATACAATA
GAGATCTCCG CACCTTCAAC CATAAAAGCC GGCGAAATTG CTAATATGAC CATCAGAGTT
CCAGTCCCGG AGGATGCGAG CGGAAGTTAT GATGCTTATA TCGAAATGAA CGCTGATGGG
AACGAGAATG ATGGATCCGT TCCGCAAATA AGCCTGAGCT TTACGGTTGA TAAACAGCCT
ACACGTCCTT ACGTAAGAAC CTTTAATACC ACAACTGCCG ACCCGATAAC GATTGAAGTT
TCGGCGGAAA CTTTTGATCA GGATGAATCT GTGCGTATCT CTCCTGAAAA GGAAGAGCCG
AGTTTTGAAA TAAACCTGAC ATGCAATTCC AGCCCTGTTA ATCTAACCCT TGTGAAAGCC
GCTGAAAGTG GTACCGTATA CTCTCAAGGA TATATATTCC CAATATGGGC GACGGAAAAT
AGTTCAAGCT ATCAGAGTGA CAGCGGGAAA TATACAGAAA CGTATAGAAC AGCTGGAGCA
ATCGGAACCT GGGAACTTAC AATTCTCTCG AAAAACATAA ACAGTTTCGA CTACTTAATA
ACTGTTGGGG AATCCGAATA A
 
Protein sequence
MSKSTALKAA SQFFSLLFCL ILLPAAFAQP EELNGTVIYE NGTYERNIVP GLEEIYGNYT 
VHDIKPDYYS VDLMPGEYET FNVSFRNEGN ENLDIAPKVA APSNDYYDVV NESWITILPE
NVTLSPGVEQ NFTIEVSVPE DAESGEYEAQ VAFTNDTYPE KYDTPVYIQE PAEGYDDYLY
TEGYDDYLYT EGYDDYLYTE GYSDPMYVNA MQLWVSVPVR PKLELQTSYV SDTVEPGKEY
IYVIKIKNVA GKDVTIDPKL MKYEIYDYSF DEPSFSDDTI EISAPSTIKA GEIANMTIRV
PVPEDASGSY DAYIEMNADG NENDGSVPQI SLSFTVDKQP TRPYVRTFNT TTADPITIEV
SAETFDQDES VRISPEKEEP SFEINLTCNS SPVNLTLVKA AESGTVYSQG YIFPIWATEN
SSSYQSDSGK YTETYRTAGA IGTWELTILS KNINSFDYLI TVGESE