Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2728 |
Symbol | |
ID | 3624492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3464665 |
End bp | 3466065 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701581 |
Product | hypothetical protein |
Protein accession | YP_306211 |
Protein GI | 73670196 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.183728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000609348 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTAAAA GTACAGCATT GAAGGCAGCA TCCCAGTTTT TTAGTTTATT GTTTTGCCTG ATATTGTTAC CGGCTGCGTT TGCTCAGCCA GAAGAGCTTA ATGGAACAGT TATCTACGAA AATGGAACTT ATGAAAGGAA TATAGTTCCT GGACTGGAAG AAATTTACGG GAATTACACC GTACATGATA TAAAACCAGA TTACTATTCG GTAGATCTCA TGCCGGGAGA ATATGAAACT TTCAACGTTA GTTTCAGGAA CGAAGGTAAC GAAAACCTCG ACATAGCTCC GAAAGTTGCA GCTCCATCTA ACGATTACTA TGATGTTGTA AACGAAAGCT GGATTACGAT TTTACCTGAA AATGTAACGT TAAGCCCTGG TGTAGAGCAG AATTTTACCA TTGAGGTAAG TGTTCCTGAG GATGCGGAAA GTGGGGAGTA TGAAGCCCAG GTAGCTTTCA CAAATGATAC CTATCCAGAA AAATATGATA CTCCTGTATA TATTCAGGAA CCTGCTGAAG GATATGATGA TTATCTATAT ACTGAAGGAT ATGATGATTA TCTATATACT GAAGGATATG ATGATTATCT ATATACTGAA GGATATAGTG ATCCTATGTA TGTCAATGCA ATGCAACTTT GGGTCTCAGT GCCTGTCCGT CCGAAGCTTG AGCTTCAGAC AAGTTATGTT TCTGACACCG TTGAGCCTGG AAAGGAATAT ATATACGTTA TAAAAATTAA AAACGTGGCA GGCAAAGATG TTACTATCGA TCCGAAGTTA ATGAAATACG AGATATATGA CTATTCATTT GACGAACCAT CTTTTAGTGA TGATACAATA GAGATCTCCG CACCTTCAAC CATAAAAGCC GGCGAAATTG CTAATATGAC CATCAGAGTT CCAGTCCCGG AGGATGCGAG CGGAAGTTAT GATGCTTATA TCGAAATGAA CGCTGATGGG AACGAGAATG ATGGATCCGT TCCGCAAATA AGCCTGAGCT TTACGGTTGA TAAACAGCCT ACACGTCCTT ACGTAAGAAC CTTTAATACC ACAACTGCCG ACCCGATAAC GATTGAAGTT TCGGCGGAAA CTTTTGATCA GGATGAATCT GTGCGTATCT CTCCTGAAAA GGAAGAGCCG AGTTTTGAAA TAAACCTGAC ATGCAATTCC AGCCCTGTTA ATCTAACCCT TGTGAAAGCC GCTGAAAGTG GTACCGTATA CTCTCAAGGA TATATATTCC CAATATGGGC GACGGAAAAT AGTTCAAGCT ATCAGAGTGA CAGCGGGAAA TATACAGAAA CGTATAGAAC AGCTGGAGCA ATCGGAACCT GGGAACTTAC AATTCTCTCG AAAAACATAA ACAGTTTCGA CTACTTAATA ACTGTTGGGG AATCCGAATA A
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Protein sequence | MSKSTALKAA SQFFSLLFCL ILLPAAFAQP EELNGTVIYE NGTYERNIVP GLEEIYGNYT VHDIKPDYYS VDLMPGEYET FNVSFRNEGN ENLDIAPKVA APSNDYYDVV NESWITILPE NVTLSPGVEQ NFTIEVSVPE DAESGEYEAQ VAFTNDTYPE KYDTPVYIQE PAEGYDDYLY TEGYDDYLYT EGYDDYLYTE GYSDPMYVNA MQLWVSVPVR PKLELQTSYV SDTVEPGKEY IYVIKIKNVA GKDVTIDPKL MKYEIYDYSF DEPSFSDDTI EISAPSTIKA GEIANMTIRV PVPEDASGSY DAYIEMNADG NENDGSVPQI SLSFTVDKQP TRPYVRTFNT TTADPITIEV SAETFDQDES VRISPEKEEP SFEINLTCNS SPVNLTLVKA AESGTVYSQG YIFPIWATEN SSSYQSDSGK YTETYRTAGA IGTWELTILS KNINSFDYLI TVGESE
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