Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2726 |
Symbol | |
ID | 3624490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3461775 |
End bp | 3462446 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637701579 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_306209 |
Protein GI | 73670194 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.658118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000458503 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAACAG CAGGACTCAA GGCGGGAGAT ATGAAATATA GTACTGTCAT CTTTGATTTT GATTATACAC TAGCCGATGC AACGAATGGT ATTGTGTCAA GTTTCAACTA CGCCTTCAAT AAGCTGGACA TTCCCTGCTT TGACCGTGAA AGTATAAAAA GAACCGTCGG ACTTCCACTC GACAAAGCAT TTATTCAGTT AACAAATAAT GAAAACGAAG TTTTGATAAA TCGTTTTCTG AGCTTTTTTC GGGAAAAGGC TAACGAGGTA ATGTCTAGAG ATACCGTGCT GTATGCTGAC ACAGTAAATA CATTAGAGCG ATTAAAGCAG AGTGGGCACA ATACAGGCAT TGTAACCACA AAATATCATT TTAGAATAGT TGAAACTTTA AACATGCATG GAGTCCTGGA TTTAATAGAT ATTATTGTTG GAGGAGAGGA TGTTAAAGTC CCCAAGCCGT CTCCAGAAGG ATTACTGCTT GCAGTTGACA ACCTTAAAGT ACAACTCGAT AATGTGCTCT ATATTGGAGA TAGTCTTATT GATGCTAAAA CAGCCCTCGC AGCAAATGTT GATTTTGTGG CCGTGACCAC AGGAACGACA AAGGAAACTG AGTTTTTACA ATATCCGTAT GTAAAAATAG TAAAAAGTTT ATCCGAGCTT TTTAGCGAGT AA
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Protein sequence | MLTAGLKAGD MKYSTVIFDF DYTLADATNG IVSSFNYAFN KLDIPCFDRE SIKRTVGLPL DKAFIQLTNN ENEVLINRFL SFFREKANEV MSRDTVLYAD TVNTLERLKQ SGHNTGIVTT KYHFRIVETL NMHGVLDLID IIVGGEDVKV PKPSPEGLLL AVDNLKVQLD NVLYIGDSLI DAKTALAANV DFVAVTTGTT KETEFLQYPY VKIVKSLSEL FSE
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