Gene Mbar_A2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2726 
Symbol 
ID3624490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3461775 
End bp3462446 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content38% 
IMG OID637701579 
Productphosphoglycolate phosphatase 
Protein accessionYP_306209 
Protein GI73670194 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.658118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000458503 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACAG CAGGACTCAA GGCGGGAGAT ATGAAATATA GTACTGTCAT CTTTGATTTT 
GATTATACAC TAGCCGATGC AACGAATGGT ATTGTGTCAA GTTTCAACTA CGCCTTCAAT
AAGCTGGACA TTCCCTGCTT TGACCGTGAA AGTATAAAAA GAACCGTCGG ACTTCCACTC
GACAAAGCAT TTATTCAGTT AACAAATAAT GAAAACGAAG TTTTGATAAA TCGTTTTCTG
AGCTTTTTTC GGGAAAAGGC TAACGAGGTA ATGTCTAGAG ATACCGTGCT GTATGCTGAC
ACAGTAAATA CATTAGAGCG ATTAAAGCAG AGTGGGCACA ATACAGGCAT TGTAACCACA
AAATATCATT TTAGAATAGT TGAAACTTTA AACATGCATG GAGTCCTGGA TTTAATAGAT
ATTATTGTTG GAGGAGAGGA TGTTAAAGTC CCCAAGCCGT CTCCAGAAGG ATTACTGCTT
GCAGTTGACA ACCTTAAAGT ACAACTCGAT AATGTGCTCT ATATTGGAGA TAGTCTTATT
GATGCTAAAA CAGCCCTCGC AGCAAATGTT GATTTTGTGG CCGTGACCAC AGGAACGACA
AAGGAAACTG AGTTTTTACA ATATCCGTAT GTAAAAATAG TAAAAAGTTT ATCCGAGCTT
TTTAGCGAGT AA
 
Protein sequence
MLTAGLKAGD MKYSTVIFDF DYTLADATNG IVSSFNYAFN KLDIPCFDRE SIKRTVGLPL 
DKAFIQLTNN ENEVLINRFL SFFREKANEV MSRDTVLYAD TVNTLERLKQ SGHNTGIVTT
KYHFRIVETL NMHGVLDLID IIVGGEDVKV PKPSPEGLLL AVDNLKVQLD NVLYIGDSLI
DAKTALAANV DFVAVTTGTT KETEFLQYPY VKIVKSLSEL FSE