| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2724 |
|---|
| Symbol | |
|---|
| ID | 3624488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3459886 |
|---|
| End bp | 3460308 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637701577 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306207 |
|---|
| Protein GI | 73670192 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.277726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000377409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTGG AAACAAGAGA AATCTCAGTA ACTGGAAAAG AAGACTGCGG AATTGTTGAT
ATTACTGAGA TAATCTCAGA AGAGGTAAGA AAATCAAAAA TAAGAAACGG AACGGTTACG
ATCTTTTGTA TTGGGTCAAC CGGAGCAATA ACTACGATGG AATTTGAGCC TAATCTCTCA
AAAGATGTCT CTGAAACGCT TGATCAGCTA ATCCCTCTTG ATAGGGACTA TCACCATCAC
AAAACCTGGG GAGATTATAA CGGAGGCTCG CATTTAAGAG CTATGCTCAT CGGCCCGAGC
CTTACAGTGC CTTTTGTTGA AAAAAACCTT ACTCTTGGAA CCTGGCAACA GATTGTATAC
ATTAACTTTG ACAGGATTGA AAAGGTAAGA AGAATCGTAC TGCAGATTCT CGGGGAATTT
TAA
|
|---|
| Protein sequence | MPVETREISV TGKEDCGIVD ITEIISEEVR KSKIRNGTVT IFCIGSTGAI TTMEFEPNLS
KDVSETLDQL IPLDRDYHHH KTWGDYNGGS HLRAMLIGPS LTVPFVEKNL TLGTWQQIVY
INFDRIEKVR RIVLQILGEF
|
|---|
| |