| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2708 |
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| Symbol | |
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| ID | 3624456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3436983 |
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| End bp | 3438995 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701562 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_306192 |
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| Protein GI | 73670177 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.624611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0488404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTT CAGATAAGAC ATCCCAAGCT GTATCTAAAA AAGTCATCGA CACAATACGA
GATACCCGAT ATTGGGACAG CCCGCAGTTC AAGTTGGTTT CCGATTTTGA ACCAAAGGGT
TCCCAGCCGC AGGCAATCGA AAAACTTGTG GAGGGGCTTG AAAAAGGGGA GCAGTACCAG
ACCCTGCTTG GGGTAACAGG GTCAGGGAAG ACCTATACTG TTGCAAATGT CATAAACCAG
GTCAGGAGAC CAACCCTTGT TATTGCTCAC AACAAAACCC TTGCTGCCCA GCTTTATAAC
GAATTCAAGG AGTTCTTCCC TGAAAACAGG GTGGAGTATT TTGTTTCCTA TTATGATTAC
TATCAGCCCG AGTCCTATCT TCCTGCCAGG AACCAGTATA TTGAGAAGGA TGCTCAGATT
AACCCGAAAA TCGAGCAGAT GCGGCTTGCT GCTACTGCTT CCCTGATGTC ACGCCAGGAT
GTTATTGTAG TTGCATCCGT ATCCTGTATC TACGGGCTTG GCAATCCTGA AAATTTCCAG
AAAATGGGGT TTGAATTAAA GGTAGGAGAT AAGGTCCAGA GAAAAGAAAT ACTGCAAAAG
CTCGTTGAAA TCCAGTTCGA ACGGAACGAC CTTGAACTTA TGCCAGGGCG CTTCAGGGTA
AAAGGAGATA CCATTGATAT TATTCCCGGA TACTTTGATA ATATTATCCG GATTGAGCTT
TTTGGAGATG AGGTCGACCG GATTTCCGAG GTGGACAAGC AGACTGGTCA GCGAACGGGA
GAGATGGACT ATTTCTTTGT TTATCCTGCC AGGCACTATG TAATTCCTGA GGAGGAGCAG
AAAAGTGCAA TTCAGTCCAT CCTCGAAGAG CTCGAAGAAC ATCTTCCTGA ACTCGGGCTG
CTCGAATCTC ACAGGTTGAA ACAGCGCACG ATTTATGATA TGGAAATGAT TCAGGAAACC
GGCAGCTGTA AAGGTATTGA AAACTATTCT CGGCATTTTG ACCACAGACA GCCAGGAGAA
CAGCCTTTCT GCCTGCTTGA CTATTTCCCT GAGGATTTCC TGATGGTAAT TGATGAGAGC
CACCAGACCA TCCCGCAGCT TCATGGGATG TACAACGGGG ACCGCTCAAG GAAGAAGAGT
CTTGTCGATT ATGGGTTCAG GCTTCCCAGT GCTTACGATA ACAGGCCTCT TAAGTTCGAC
GAATTCGAGA AGTACATGAG AAACGTGATT TTTGTCTCGG CAACACCTTC CGATTATGAA
AGAGAGCACT CAGCTCATAT CGTGGAACAG ATTATCCGCC CAACAGGGCT TGTTGACCCT
GAAGTGGAAA TTCGTCCTCT CGAAGGGCAG GTCAGAGATG TCATGCAGGA GATTCGGAAG
ATTGTGGAAA GGGGAGACCG TGCTCTTGTA ACCACCCTGA CAAAGAAACT TGCGGAAGAA
CTGACTGAGT ATCTTGCAAG GAACGAAATA AAAGCTCGTT ACCTGCACTC GGATATTAAA
ACAATAGAAA GGACTGAGAT TATCCGCGAG CTCCGCCTTG GAAAATTCGA TGTCCTTGTA
GGGATAAACC TGCTCAGAGA GGGGCTTGAT ATTCCGGAAG TGGGCTTCAT TGGCATACTG
GATGCGGATA AGGAAGGATT CCTGAGGGAC TCAAAAAGCC TGATCCAGAT CATAGGCCGC
GCGGCCCGGA ATGCCAGCTC GAAGGTTGTC CTGTATGCCG ATAACATGAC GGATTCTATC
AAAAAAGCCG TTACTGAGAC CGAACGCCGC CGTTCCATGC AAATCGCCTA CAATAAGGAA
CACGGCATAG TCCCGACAAC TATCAGAAAA CCAATTAGAG AAAAAGTTGT GGATATTACC
GACACAAAAC ACATCCCGAA GACCGATATT CCCAATATGA TTATCGAACT GGAAACCGAA
ATGAGGGAAG CTGCTGACAG GCTGGACTTC GAAAGGGCAA TTCAGGTAAG GGAAATGATA
AAGAAGCTGG AAAAAGAGAT AAAAGTAGTC TGA
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| Protein sequence | MKSSDKTSQA VSKKVIDTIR DTRYWDSPQF KLVSDFEPKG SQPQAIEKLV EGLEKGEQYQ
TLLGVTGSGK TYTVANVINQ VRRPTLVIAH NKTLAAQLYN EFKEFFPENR VEYFVSYYDY
YQPESYLPAR NQYIEKDAQI NPKIEQMRLA ATASLMSRQD VIVVASVSCI YGLGNPENFQ
KMGFELKVGD KVQRKEILQK LVEIQFERND LELMPGRFRV KGDTIDIIPG YFDNIIRIEL
FGDEVDRISE VDKQTGQRTG EMDYFFVYPA RHYVIPEEEQ KSAIQSILEE LEEHLPELGL
LESHRLKQRT IYDMEMIQET GSCKGIENYS RHFDHRQPGE QPFCLLDYFP EDFLMVIDES
HQTIPQLHGM YNGDRSRKKS LVDYGFRLPS AYDNRPLKFD EFEKYMRNVI FVSATPSDYE
REHSAHIVEQ IIRPTGLVDP EVEIRPLEGQ VRDVMQEIRK IVERGDRALV TTLTKKLAEE
LTEYLARNEI KARYLHSDIK TIERTEIIRE LRLGKFDVLV GINLLREGLD IPEVGFIGIL
DADKEGFLRD SKSLIQIIGR AARNASSKVV LYADNMTDSI KKAVTETERR RSMQIAYNKE
HGIVPTTIRK PIREKVVDIT DTKHIPKTDI PNMIIELETE MREAADRLDF ERAIQVREMI
KKLEKEIKVV
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