Gene Mbar_A2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2706 
Symbol 
ID3624454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3433518 
End bp3435398 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content36% 
IMG OID637701560 
Producthypothetical protein 
Protein accessionYP_306190 
Protein GI73670175 
COG category[S] Function unknown 
COG ID[COG1689] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0116563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0217299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGGA AAATATATGC TCCTGTTATA ATTTTAATGA TTCTAATAAT TACAAGTGGA 
TGCATTGAGG GTAAGCATCT TTCTATTGAA GGTAAGAATT CTTCTATTGG GGGTGAGTAT
TCTCCTAGCC AAGAACCCAA ACAAATAACA AACTTAAACG AGTCTTGGGT TACGGATACA
AGAAATCGGA TGGATGACTC TCAGGGTATT GATGGAGGTT ACTCTGATTT TCCCCCACAA
GAGCCTATAT TATATTCTAC TTTTTACTTT TTGGAGTCTT TAAAATTATT AGATAAAGAG
CCTAAGTATG AACAGGCCAC AATAGACTGG CTATTATCAC AAGAACAGGA AATAACTAGA
CAGGACAATA ATTCGAATAT GGATAATATA TATTTTCTTA CAATAAGTCT GGATATCCTT
AAAGTTAAAC CGGCCAATAG GTCTAATCTA ATATCAAAAG TAATGGAATT ACAAATGCCT
GATGGATCAT TTGCCCAAAA AAAAGGAGAT AAAGGAACAC TGCTCGATAC ATTCAGAGCT
ATCACCACAT TACATACTCT TGATGTGGAT TTAAATCAGG TACCCTTGAC AAAAAACTGG
CTAATTGAAA AGTGGATGGA ACCCGATGAA AATGAAAATT TAATGTATTC AACAAGTGAA
GCTTCTCTAC TCATTTCAGC ATTAAAACTT TACCAGGTCA ACGTCTCTTC ATTGCAGAAC
CAATCCCCAA GGATGGAAAT AATAAAGGAA CAAGAAAATA TCATTGAGAA CCAATTGAAA
TTATTGCCTG ATACTCAAAT GGACCTGTTA ACCTTGAGTT CATTTACTGA TTTTTTATTG
ATAAATGGCA GTGTTTCCTC TGAGATTCGG TCTGATATTG AGACGTATCT GCAAAAAAGG
CAATTAGAAG ATGGAGGGTT TAACGCTTTA TTAGATAAAT ATGGGGAGCC ACAAGGAACC
TACTTGGCTC TAAAAATCGC TTCGAACCTA GGCTTTGATT TAAATGATAA TGTATCCACA
TTCATTTACA ATTACGAACC TTTGAATGGA ATCGGAGGCT TTCGACCGGC TTATCGTCTT
ATATCTTCTT CTGAAAATAC ATATCTAGCT GTGAAATCTC TAAAAGTACT GGGTTCAGAG
CCTTCTGATA AAGAAAAACT TCTTAAATAT GTCGATAACA ACTGGCAGGA AGAGTCCAAA
AAAGCAAAAA CTGCATATTA TTTATTAGTG ATATGCAATC TCCTCAATCA GCCGTATCCT
ACGGACACAC AGTTTAGAGA AGAGGTTAAA ACAAGCTTTG ATAAATTCGC TAATCAACCT
ATTGATTCAA ATGATTTGGA AGAGGTTTTA TATCTAGCAA AAGTGGCCAA TCTTCTTGGC
ATTGAGCTAA ATAACAAAGA TAAACTGATT GCCAAACTCC AGAGTTCTCA ACAAGAAGAC
GGAGGTTTTG GCTTTGAAGC TTCAGATCTA TTTATGACAT TTTACGTTGT GAACACTCTG
GAAGAACTTG GTAGTTGCCC CGTGGACAAA AAAGGTTGTA TTTCTTGGAT ACAGGAAGGC
CAAATTACTG ATGGAGGTTT CATTATCCGG AGAGGTCCGG TTCATACTAA TAGTTCAGAT
ATCTATTCTA CATATATGTC CGTAGTCTCT TTAAATGCTC TTGATGCTAA GCCGGAAAAT
TTTGATAAAT TATTCGAATG GCTTAAAGAC TGCCAAGATG AACATGGAGG GTTCAAATTA
GCACCAAAAT ATGCTAATCT GGACACTTCA GAGAGCTCAT TTGAAGCAAA ATTGGAATAT
ACTAGCTGGG GGCTCATGGC ATGGAGTACT TTATCTGATG AACAGACTTC CAAAAATCTA
CTAAATAACT CAGGGACATA A
 
Protein sequence
MSRKIYAPVI ILMILIITSG CIEGKHLSIE GKNSSIGGEY SPSQEPKQIT NLNESWVTDT 
RNRMDDSQGI DGGYSDFPPQ EPILYSTFYF LESLKLLDKE PKYEQATIDW LLSQEQEITR
QDNNSNMDNI YFLTISLDIL KVKPANRSNL ISKVMELQMP DGSFAQKKGD KGTLLDTFRA
ITTLHTLDVD LNQVPLTKNW LIEKWMEPDE NENLMYSTSE ASLLISALKL YQVNVSSLQN
QSPRMEIIKE QENIIENQLK LLPDTQMDLL TLSSFTDFLL INGSVSSEIR SDIETYLQKR
QLEDGGFNAL LDKYGEPQGT YLALKIASNL GFDLNDNVST FIYNYEPLNG IGGFRPAYRL
ISSSENTYLA VKSLKVLGSE PSDKEKLLKY VDNNWQEESK KAKTAYYLLV ICNLLNQPYP
TDTQFREEVK TSFDKFANQP IDSNDLEEVL YLAKVANLLG IELNNKDKLI AKLQSSQQED
GGFGFEASDL FMTFYVVNTL EELGSCPVDK KGCISWIQEG QITDGGFIIR RGPVHTNSSD
IYSTYMSVVS LNALDAKPEN FDKLFEWLKD CQDEHGGFKL APKYANLDTS ESSFEAKLEY
TSWGLMAWST LSDEQTSKNL LNNSGT