Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2706 |
Symbol | |
ID | 3624454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3433518 |
End bp | 3435398 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637701560 |
Product | hypothetical protein |
Protein accession | YP_306190 |
Protein GI | 73670175 |
COG category | [S] Function unknown |
COG ID | [COG1689] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0116563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0217299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGGA AAATATATGC TCCTGTTATA ATTTTAATGA TTCTAATAAT TACAAGTGGA TGCATTGAGG GTAAGCATCT TTCTATTGAA GGTAAGAATT CTTCTATTGG GGGTGAGTAT TCTCCTAGCC AAGAACCCAA ACAAATAACA AACTTAAACG AGTCTTGGGT TACGGATACA AGAAATCGGA TGGATGACTC TCAGGGTATT GATGGAGGTT ACTCTGATTT TCCCCCACAA GAGCCTATAT TATATTCTAC TTTTTACTTT TTGGAGTCTT TAAAATTATT AGATAAAGAG CCTAAGTATG AACAGGCCAC AATAGACTGG CTATTATCAC AAGAACAGGA AATAACTAGA CAGGACAATA ATTCGAATAT GGATAATATA TATTTTCTTA CAATAAGTCT GGATATCCTT AAAGTTAAAC CGGCCAATAG GTCTAATCTA ATATCAAAAG TAATGGAATT ACAAATGCCT GATGGATCAT TTGCCCAAAA AAAAGGAGAT AAAGGAACAC TGCTCGATAC ATTCAGAGCT ATCACCACAT TACATACTCT TGATGTGGAT TTAAATCAGG TACCCTTGAC AAAAAACTGG CTAATTGAAA AGTGGATGGA ACCCGATGAA AATGAAAATT TAATGTATTC AACAAGTGAA GCTTCTCTAC TCATTTCAGC ATTAAAACTT TACCAGGTCA ACGTCTCTTC ATTGCAGAAC CAATCCCCAA GGATGGAAAT AATAAAGGAA CAAGAAAATA TCATTGAGAA CCAATTGAAA TTATTGCCTG ATACTCAAAT GGACCTGTTA ACCTTGAGTT CATTTACTGA TTTTTTATTG ATAAATGGCA GTGTTTCCTC TGAGATTCGG TCTGATATTG AGACGTATCT GCAAAAAAGG CAATTAGAAG ATGGAGGGTT TAACGCTTTA TTAGATAAAT ATGGGGAGCC ACAAGGAACC TACTTGGCTC TAAAAATCGC TTCGAACCTA GGCTTTGATT TAAATGATAA TGTATCCACA TTCATTTACA ATTACGAACC TTTGAATGGA ATCGGAGGCT TTCGACCGGC TTATCGTCTT ATATCTTCTT CTGAAAATAC ATATCTAGCT GTGAAATCTC TAAAAGTACT GGGTTCAGAG CCTTCTGATA AAGAAAAACT TCTTAAATAT GTCGATAACA ACTGGCAGGA AGAGTCCAAA AAAGCAAAAA CTGCATATTA TTTATTAGTG ATATGCAATC TCCTCAATCA GCCGTATCCT ACGGACACAC AGTTTAGAGA AGAGGTTAAA ACAAGCTTTG ATAAATTCGC TAATCAACCT ATTGATTCAA ATGATTTGGA AGAGGTTTTA TATCTAGCAA AAGTGGCCAA TCTTCTTGGC ATTGAGCTAA ATAACAAAGA TAAACTGATT GCCAAACTCC AGAGTTCTCA ACAAGAAGAC GGAGGTTTTG GCTTTGAAGC TTCAGATCTA TTTATGACAT TTTACGTTGT GAACACTCTG GAAGAACTTG GTAGTTGCCC CGTGGACAAA AAAGGTTGTA TTTCTTGGAT ACAGGAAGGC CAAATTACTG ATGGAGGTTT CATTATCCGG AGAGGTCCGG TTCATACTAA TAGTTCAGAT ATCTATTCTA CATATATGTC CGTAGTCTCT TTAAATGCTC TTGATGCTAA GCCGGAAAAT TTTGATAAAT TATTCGAATG GCTTAAAGAC TGCCAAGATG AACATGGAGG GTTCAAATTA GCACCAAAAT ATGCTAATCT GGACACTTCA GAGAGCTCAT TTGAAGCAAA ATTGGAATAT ACTAGCTGGG GGCTCATGGC ATGGAGTACT TTATCTGATG AACAGACTTC CAAAAATCTA CTAAATAACT CAGGGACATA A
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Protein sequence | MSRKIYAPVI ILMILIITSG CIEGKHLSIE GKNSSIGGEY SPSQEPKQIT NLNESWVTDT RNRMDDSQGI DGGYSDFPPQ EPILYSTFYF LESLKLLDKE PKYEQATIDW LLSQEQEITR QDNNSNMDNI YFLTISLDIL KVKPANRSNL ISKVMELQMP DGSFAQKKGD KGTLLDTFRA ITTLHTLDVD LNQVPLTKNW LIEKWMEPDE NENLMYSTSE ASLLISALKL YQVNVSSLQN QSPRMEIIKE QENIIENQLK LLPDTQMDLL TLSSFTDFLL INGSVSSEIR SDIETYLQKR QLEDGGFNAL LDKYGEPQGT YLALKIASNL GFDLNDNVST FIYNYEPLNG IGGFRPAYRL ISSSENTYLA VKSLKVLGSE PSDKEKLLKY VDNNWQEESK KAKTAYYLLV ICNLLNQPYP TDTQFREEVK TSFDKFANQP IDSNDLEEVL YLAKVANLLG IELNNKDKLI AKLQSSQQED GGFGFEASDL FMTFYVVNTL EELGSCPVDK KGCISWIQEG QITDGGFIIR RGPVHTNSSD IYSTYMSVVS LNALDAKPEN FDKLFEWLKD CQDEHGGFKL APKYANLDTS ESSFEAKLEY TSWGLMAWST LSDEQTSKNL LNNSGT
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