Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2691 |
Symbol | |
ID | 3624801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3410769 |
End bp | 3413171 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701545 |
Product | hypothetical protein |
Protein accession | YP_306175 |
Protein GI | 73670160 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.337462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0535481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCTA AAATGGTGCA GTCTCAAGCA ATAAACCCGA ATCCTGTGAT CAGTGTGGCA AAGGATGGTA CAGTTCTTTA CTCTAATGAG GGAGGAAAGC CTTTATTGCA TGAGTGGGGC GTGAGAGTTA GAGAAAAATT GCCTCAACAT ATCAAAATTT TTGTTCAAAA GGCAATTTTC CAGAAATGTA TTGAAAAAAT AAAAATTAAA GTGGGGAAAA GAGTATATTT TCTCGTTTTT CATCCCTTGC CTGAACAAGA ATGCGTAAAC ATTTATGGAT TTGATATAAG TGAGAGTAAA AAGCTTGAAG GAAAACTCCA GGAAAGTGAA GCTCTAAAGA TGACAAATCT GGAACTTGCC AGTATTATTG ATGTGCAGGC TGTCCAGTCC CTGATGGAGG ATTTCTATAA GCTTGTTAGC ATTCCAATAG CCCTGGTTGA TCTCAAAGGC AATGTTCTAT CAAGTGTTGG ATGGCAGGAC ATCTGCACGA GATTTCACAG GATTCATCCC GAAGCCTGCA AACACTGCAT GGAAAACTAC ATAACGCTAT CCTCAGGTGT TCTCCCGAGA GAATTTAAGC TGAATAAATG CAAAAACAAT ATGTGGGATA TAGCGACTCC CATTATTGTG GATGACCAGC ATGTTGGCTA TGTCTTTTCA GGGCAGTTCT TTTTTGAGGG TGAGCCTGTA GACTATGAAT TATTCCGAGC CCAGGCCAGA AAATATGGCT TCAATGAGCA GGAGTACATA GCCGCTCTTG AGAAAGTTCC AATGTTGAAC CCTGCAGCTG TGAACACATG CATGTCTTTT CTTACAGCAT TTGCCAATAT GGTTTCACAG CTAGGCTACA GCAATACCAG GCTGTCTCAA TCACTGGCGG AGCGTGATGC TGTGGTTGAT GCATTGCAAG AGAGTGAGAA GCGGCTGCGT CTCCTGAGCA ACAACCTGCC AGACAGCGCG GTATATCAGT ATGTCCTTGA GCCCGATGAC AATACCAATT TTGTATACTT CAGCACAGGT GTCGAGCGGC TGTTCGGCAT CAGCATATCC GACGCGCTTC GTGATCCAGA AATGCTGTAC AGGCAAATTC CACAGACGTA CTTAGAACGT CTCGTCGAAG CCGAGATACG AAGTGCCCGT GAATTGTCAG ATTTTGATAT GGAATTACCT CTGCAGCTTT CCGACGACCA GGTTAAATGG ATACGGTTGC ACTCCCGTCC TCGCAGGCTG CCCGATGGCC GAATAATCTG GGACGGCGTA CTGACTGACA TTACCAAGCT AAAGCAGGCT GAGGAGGTGC TGTGCGAGAG TGAATCACGC CGTAAGGTTA CCGAAGCTGT CGATACTGAA CGGAAGCGGT TTTTTGATGT ACTGGAGGCG CTGCCGGTAA TGGTTGCTCT ATTAACACCT GACCATTACA TTGCCTTCGC AAACCGCTGT TTCCGTGAGC AGTTTGGCGA GTTAGGCGAT CAACACTGTT TTGAGTATTG TTTTGGGTGT ACCGAACCCT GTGAGTTTTG TAAAGCATAT AAGGTACTTG AAACCGGCCA ACCCTATCAT TGGCAGGTTA CCTTACCAGA CGGTGGTATG TTTGATGCTT ATGACCTTCC GTTTACAGAC GTTGATGGTT CTCCCCTGAT CCTTGAGATG GATATTGACA TCACCAAACG AAAGGAAGCT GAAGAAGCTC TTGCAAATAT TGAGACTGCT CGGAAGAAGG AAATCCATCA TAGAATAAAG AATAACCTTC AGGTAATTTC CTCTCTGCTT GATCTTCAGG CTGAACAGTT TAGAAATAGA GAGGATATTA AGGATTCAGA AGTTCTGGAA GCCTTCAGAG AAAGTCAGGA TAGAGTAATA TCTATGGCTT TGATACACGA GGAACTATAT AGAGGCGGCG GATTCGAAAC ACTAAACTTT TCCCCGTACA TTCAGGAACT TGCTGAAAAT CTTTTATTAA CATACAGGCT TGGAATCACT GATGTCAGCT TAAGTATGGA TATGGAAGAG AACCTTTTAT TTGATATGGA TATTGCAGTG CCATTAGGAA TAATTGTCAA TGAACTTGTT TCCAATTCCC TCAAGCATGC ATTTCCTGAC AGAGCGAAAG GAGAAATCCG AATTAAACTC AGCCGGGAGG AAAACAAAGA GTATATAAAA AACATAAACG AAGGTCGGAA GAGCACTAAC TTCATTCTAA CCGTTTTAGA TGACGGTATA GGCATTCCTG AAAATCTTGA AATTAAAGAG CTTGATAGTC TGGGATTTCA GCTTATAACT TCTCTTGTAG ACCAATTAGA TGGGGAGTTC GAATTGAAAA GGAACAATGG CACAGAATTC ATTATGAGAT TTAGAGTGAT GGAAAGAAAT AATCTGGTTC AAGCTGGTCT AAAATCACAA TAA
|
Protein sequence | MTAKMVQSQA INPNPVISVA KDGTVLYSNE GGKPLLHEWG VRVREKLPQH IKIFVQKAIF QKCIEKIKIK VGKRVYFLVF HPLPEQECVN IYGFDISESK KLEGKLQESE ALKMTNLELA SIIDVQAVQS LMEDFYKLVS IPIALVDLKG NVLSSVGWQD ICTRFHRIHP EACKHCMENY ITLSSGVLPR EFKLNKCKNN MWDIATPIIV DDQHVGYVFS GQFFFEGEPV DYELFRAQAR KYGFNEQEYI AALEKVPMLN PAAVNTCMSF LTAFANMVSQ LGYSNTRLSQ SLAERDAVVD ALQESEKRLR LLSNNLPDSA VYQYVLEPDD NTNFVYFSTG VERLFGISIS DALRDPEMLY RQIPQTYLER LVEAEIRSAR ELSDFDMELP LQLSDDQVKW IRLHSRPRRL PDGRIIWDGV LTDITKLKQA EEVLCESESR RKVTEAVDTE RKRFFDVLEA LPVMVALLTP DHYIAFANRC FREQFGELGD QHCFEYCFGC TEPCEFCKAY KVLETGQPYH WQVTLPDGGM FDAYDLPFTD VDGSPLILEM DIDITKRKEA EEALANIETA RKKEIHHRIK NNLQVISSLL DLQAEQFRNR EDIKDSEVLE AFRESQDRVI SMALIHEELY RGGGFETLNF SPYIQELAEN LLLTYRLGIT DVSLSMDMEE NLLFDMDIAV PLGIIVNELV SNSLKHAFPD RAKGEIRIKL SREENKEYIK NINEGRKSTN FILTVLDDGI GIPENLEIKE LDSLGFQLIT SLVDQLDGEF ELKRNNGTEF IMRFRVMERN NLVQAGLKSQ
|
| |