Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2690 |
Symbol | |
ID | 3624800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3408364 |
End bp | 3410211 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701544 |
Product | multidrug resistance ABC transporter |
Protein accession | YP_306174 |
Protein GI | 73670159 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0586583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.13127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAGA ATAACGTGAT GCCTCATAAT ATGCCTCATA ATATTACAGG CCGCCCGGCA GGAGGACCAA GCGCTTTTCT TCAAAGGGAA AAAACGGAAA TCAAGGACGT TAAGGGAACA TTCATACGCA TTATTATGTA CCTTGGCAAA TGGTGGCGCA CATTGCTCAT CATTTTTTTC TGTGCTCTTG TTACAACAGT GATCACCATT ATCGGCATTC AACTAAACGG GTACGCAGTC GACGAGTTCA TCTCTAAAAA GGATATTGCC GGACTTGCTC GCATCTGTAT TATCATGATT CTTATTTACC TTGTTGCGGT TTTTTCTACT TACATGCAGA ATTCCCTGAT GATCCGTGTT GCTCAGAAAA CTTCGGCTAG TATCCGGAAC GATCTTTTCA GCAGCCTGCA AAAGCTGCCC CTCAAGTATT TTGATACCCA CTCAAGCGGG GACCTCATGA GCCGCCTGAC AAACGATGTT GACAACATCA ACCTTACACT TTCACAGAGT GTCGTGCAGC TTTTTTCCGG CGTCATCAGC GTGGTCGGTA TGTTGATAGC GATGCTGCTG CTCAGCCCGC TGCTTACGCT GATCGGGCTG CTGACAACGC CTCTGATGTT CTTTACGTCA AAAGTCCTTG CAGTAAAGTC TCAGAAGTTT TTTAAGGAAC AGCAATATGA GCTTGGACGG CTTAACGGAT ATATCGAGGA AATGGTCTCC GGCCAAAAAG TTATTAAGGT CTTTTCCCGA GAAAAGGAGG TGGAGGGTCA CTTCAAAGAA ATCAATGAAA AGCTTGTTTC CAGTTCTATG AAAGCACAGG CAATAAGCAG CGTCATGGGA CCTGTGAATA ACACTATCAA TAATCTGACC TATTTGATTA TCACGGTCTG CGGTGGCGTT TTAATCATAA AGGGATTTGC GGGAATCACT GTTGGCGTAA TATTTTCTTT CCTGCTCTAT ATGCGCAATT TTACCCAGCC AATCAACAAT ATTCTCAACC TTTTCAGCAC TATCCAGTCA GCCCTTGCAG GCGCAGAGCG AGTGTTTGAG GTAATGGACG AGGAAAAAGA AAAAGATGCC GATAATGCCA GAGACATTCA AAACATTGAA GGCAACGTGA AAATTGAATC TGTTAATTTT TCATACATAC CTGGTAAGCC TGTACTTAAA GAGGCAACAA TTTCTGCGAA AAAAGGTCAG ACAATTGCCA TCGTGGGCCC TACGGGTGCT GGGAAAACAA CCATTATCAA TCTGCTCACC AAGTTTTATG GCATTGATGA CGGAGCAATC TATATTGATG GAAAGAATAT AAATGCCATT ACTCGAAAGA GTCTGCGGCA GTCCATTTCA ATGGTACTCC AGGATACTTT TCTTTTCTCG GACACCATAC GCGAGAATAT CCGCTATGGC AGGCTGACAG CAACGGATGA AGAAGTTGAA CAGGCAGCAA AGCTGGCACA TGCCCATGAC TTTATTATGC AACTGCCACA GGGTTATGAT ACAATTCTTT CTGACAATGG CGGCAACCTT TCACAGGGAC AGCGGCAATT GCTTAGTATT GCGAGAGCGA TGATCGCACA ATCTTCTGTG TTGATACTTG ATGAAGCGAC TTCTTCAATC GATACACGGA CAGAGCTGAT TATTCAGAGT GCTCTGCTCA AACTAATGCA CGGAAAAACG AGTTTTGTTA TCGCACACCG CCTTTCCACC ATCAAAAACG CAGATAAAAT CATCGTTTTA GACGGCGGTC GAGTAGTAGA AACAGGTACG CATAGCGAAC TGCTTGTTTC GGGCGGTTTC TATGCCAACC TTTACAAAAG TCAGTTCAAA AAAGGCATGG CAATATAA
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Protein sequence | MPQNNVMPHN MPHNITGRPA GGPSAFLQRE KTEIKDVKGT FIRIIMYLGK WWRTLLIIFF CALVTTVITI IGIQLNGYAV DEFISKKDIA GLARICIIMI LIYLVAVFST YMQNSLMIRV AQKTSASIRN DLFSSLQKLP LKYFDTHSSG DLMSRLTNDV DNINLTLSQS VVQLFSGVIS VVGMLIAMLL LSPLLTLIGL LTTPLMFFTS KVLAVKSQKF FKEQQYELGR LNGYIEEMVS GQKVIKVFSR EKEVEGHFKE INEKLVSSSM KAQAISSVMG PVNNTINNLT YLIITVCGGV LIIKGFAGIT VGVIFSFLLY MRNFTQPINN ILNLFSTIQS ALAGAERVFE VMDEEKEKDA DNARDIQNIE GNVKIESVNF SYIPGKPVLK EATISAKKGQ TIAIVGPTGA GKTTIINLLT KFYGIDDGAI YIDGKNINAI TRKSLRQSIS MVLQDTFLFS DTIRENIRYG RLTATDEEVE QAAKLAHAHD FIMQLPQGYD TILSDNGGNL SQGQRQLLSI ARAMIAQSSV LILDEATSSI DTRTELIIQS ALLKLMHGKT SFVIAHRLST IKNADKIIVL DGGRVVETGT HSELLVSGGF YANLYKSQFK KGMAI
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