Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2670 |
Symbol | |
ID | 3624780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3383206 |
End bp | 3385113 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701526 |
Product | hypothetical protein |
Protein accession | YP_306156 |
Protein GI | 73670141 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.734137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.611525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC GATTTATTGC ATTATTGTTA TCAATTTTTA TATTTATAAC AGGATCTGGA ATAAGTGCTG CAGCTGACAT AGTAGTGCAC AACGGTGAAT CAATACAGTC AGCTGTGGAC AATGCAACGC ACGGAGATAC TATAATTGTA GAACCCGGTA CTTATTATGA GAACGTTACT CTCCGTACAT ACGATCTGGT CATTATGTCC CAATCAGGCA ATCCTGAAGA CACGATAATT CAAGGGGATG GTTTTTACCT CACAGGTGAT GCACAGGAGA TAACTATTAA AGGTTTTACT CTAAAAGGTA CTGACACTTC TTATGGAATA AATCTCGGTC AGTTCTCTAA CTGCATGATT GAAAATAATA AAATTCTGAA TTATGGTACA GGTATTGACA CAAATCTGTA CTCTACTTTT ACAATAAATG ACAATGAAAT TTCAAATTGT AAATCAGGAG TTTTTGTTGG GGAATGTTAT TTCAGTGCTA TTGTCAAAAA CAACAGGATT TCTAACTGTG AAACAGGAGT CGTTGTGGGA GATTCAGGAA ATTCCCAAAT TGAGAATAAC ACAATTACAG AAAATGATCA GGGTATATCC CTGATGTACG AAGGCCGCGC TGATATTGCT GGTAATACTA TAAGTTTTAA CAAGAAATGT GGGCTTTACG ATAAAGCAGA TGCTAGTAGC AAGATCTATA ACAATTATTT CAATAACACA GTAAATGTAA TTTTTGATGA CTATTATGGT TACCCTAACG TCTGGAACAT TACCAGAACA ACAGGAAAAA ATATTATAGG CGGCCCTTAT ATTGCAGGAA ACTATTGGGC TAAACCTAAT GGGACAGGCT TTTCTCAAAT ACATTACGAT GTAGACGGAG ACGGTATAGC AGAGGGGATA GCAAACCTTA GCGAAAGTGA GATCGACTAT GCAGCTCTTG CAACGTTGAA TTCTTCAACG CCTGAGCAAC CTCCGGCATC AACTAATTCA ACAGTCACTC CTTCCGATAA CGTAACAGAG ACTCCTTCAG AGGAAATTGT AGATAATAAT AGCAGCAATT CAGATAATAG TTCAGATAAT AGTTCAGATA ATAGTTCAGA TAATAGTTCA GATAACAGTC CAGATAATAT TTCAGATAAC AGCTCAGATA ATAGTTCAGA TGACAGTTCT GATAGCAATT CAGATGGCAG TTCTGGTGGA AGCAGCCACA GAAGCGGAAG TAGCGGTGGC GGTGGTGGTT CTCCTGAACC TCAAACCAAC GTTCAAGTCA AGGAACTTTC ACAGGCACAG GTTTTAAACG GAAAGCCTGT AATGTTTGAT TTTCCAAATA ACGTAACCTG TGTTGTGTAT GTCAGCTTTG ATGCAAAGAA GACTGCAGGT AAGATTACAG CCATTGCCGA ACAGCTTAAA GGAAAATCGA CTCTGGTTTC AGAACTGAAC TCGGGTGAGG TCTATAAGTA CTTCAACCTC TGGGTTGGAA ACTCAGGATT TGCTACCTCA AAGAATATTG AAAACCCTGA AGTATGTTTC AAGGTTGAAA AGTCCTGGCT GCAGGATAAG AAGATCGACC AGAATTCAAT CACACTCAAT AGCTACAGTG ACAAAAAATG GTCACAACTA CCAACAACCC TGTTAAAAGA AGACAACCAA TACCTGTATT TCACGGCACA CCCCTCAGAA TTCTCATTCT TTGCAATAAC CGGAGCAACA CCAGAGGGAG CCGGAAATGA AACACAGGCT GAACCTAATG TTGAAAACCT CAGTAATAAT ACTGGAAACA ATACTGGAAA CGCAACAACA GGTGTTGAGC AACCTTCTGA GCAAGAAGAA AATAAAGGTA TTCCGGGCTT TGAAATGATT TACGGAGTAA TAGGGCTTAC TGGAGTGTAC CTGCGTAGAA GAAGGTGA
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Protein sequence | MKNRFIALLL SIFIFITGSG ISAAADIVVH NGESIQSAVD NATHGDTIIV EPGTYYENVT LRTYDLVIMS QSGNPEDTII QGDGFYLTGD AQEITIKGFT LKGTDTSYGI NLGQFSNCMI ENNKILNYGT GIDTNLYSTF TINDNEISNC KSGVFVGECY FSAIVKNNRI SNCETGVVVG DSGNSQIENN TITENDQGIS LMYEGRADIA GNTISFNKKC GLYDKADASS KIYNNYFNNT VNVIFDDYYG YPNVWNITRT TGKNIIGGPY IAGNYWAKPN GTGFSQIHYD VDGDGIAEGI ANLSESEIDY AALATLNSST PEQPPASTNS TVTPSDNVTE TPSEEIVDNN SSNSDNSSDN SSDNSSDNSS DNSPDNISDN SSDNSSDDSS DSNSDGSSGG SSHRSGSSGG GGGSPEPQTN VQVKELSQAQ VLNGKPVMFD FPNNVTCVVY VSFDAKKTAG KITAIAEQLK GKSTLVSELN SGEVYKYFNL WVGNSGFATS KNIENPEVCF KVEKSWLQDK KIDQNSITLN SYSDKKWSQL PTTLLKEDNQ YLYFTAHPSE FSFFAITGAT PEGAGNETQA EPNVENLSNN TGNNTGNATT GVEQPSEQEE NKGIPGFEMI YGVIGLTGVY LRRRR
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