| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2643 |
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| Symbol | |
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| ID | 3625662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3344599 |
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| End bp | 3346074 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701499 |
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| Product | DNA repair helicase RAD25 |
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| Protein accession | YP_306129 |
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| Protein GI | 73670114 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0920189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA TTAGCTTCAA GCAGGGAACG CTTCTTATAG AAGGTAATGT GAGAGTTCCC
AATGCAGTCT GGGATGAAAG AAGCGGAAAT TTCAGAGCTC TTGCCCTTTA TTACAGAGAT
ATAATAGATT ATCTGAAAAA TTCTAAGATC CCGTTTAAAG ATGAGGTGCT TGACCTCCTC
CCCTGTCCTG ATCTGGCAGC AGCTTATGAA GCGTCTGGAA AGAAACTTAA GTTAAGAGAC
TACCAGGCCG AAGCTCTTGT GACCTGGGGA GAAAATAATA GATGGGGAGC GCTTGTCCTG
CCAACAGGAA GCGGAAAAAC CCTTGTTGGA ATCAGGGCAA TTGCAGGCTG CAATAGCCCT
GCCCTTGTGG TTGTCCCGAC GCTTGACCTG CTTGAACAAT GGAAAAAACA GCTTGAAGAA
GCTTTTACGA TGGAAATCGG AAAGCTTGGG GGTGGGGAGA AGAAAATTCT TCCAATAACC
GTTTCCACGT ATGACTCTGC TTATATTCAC GCCGAAACCC TTGGGAACAG GTTTGGTCTC
CTTGTTTTTG ATGAAGTCCA TCACCTGCCT GCAGCCGGAT ACAGGAGCAT TGCCGAGTTT
TCCGCAGCGC CTTACAGACT TGGGTTGACA GCCACTTACG AGCGGGAAGA TGAGTTACAC
TTGGAGCTTA ACAGGCTTGT CGGGGGAAAA GTATATGAAA AGCACGTCTC GGAACTTGCA
GGCAGCCACC TTGCCCCTTA CAGGATAAAA CGGATAGCTG CTGCGCTTAC GGATGAGGAA
AGGAAAGAAT ACAACAAATG TTATTCGGTT TATACAGATT ATCTCCGGAA AACCGGAATT
GTTCTTCGGG GGCCAAGGGA TTTTCAGAAA CTGGTTATGA GAAGCGGGAG AGACCCGGAA
GCCAGAAAAG CACTTCTTGC AAGAAACGCA GCAAGAGAAC TTGCTTTCAA CACGGAGTCT
AAAATTGAAA AGTTAAAAGA GATCCTGAAT ACACACCGGG AAGACAGGAT CTTCATTTTT
ACGGAACATA ACCGGCTTGT CCACCGGATT TCCAGGGAAT TTCTTATCCC TGCGATCACA
TACAGAACGC CTGCAAAAGA AAGGAATTCC ATCCTCGAGA AGTTCAAAGA AGGAAAATAC
AGGGCTGTAG TTACTTCAAA GGTGCTTGAC GAGGGCATAG ACGTTCCTGA GGCAAACATA
GGAATTATAG CAAGCGGTAC AGGGAGCAAA TTAGCATATA TCCAGCGCCT GGGAAGGATC
CTCAGGAAGA AAGAAGGAAA AGAAGCCATA CTCTATGAGA TTATAACCGA AGAAACAACC
GAAGCCGGAA CTGCCAGGAG AAGAAAAAAA GCTGTTTCAA CTCGAAAAGA CTTTGGAAAA
TCAGCGCAAA AAAATCAGAT GAAGAGGATA TCAGGAAAGG AAAGTCAGAT GAAGAAAGAA
AAAAGCTCTG GGGGCGGCTC TTCTGCTCAC GTCTGA
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| Protein sequence | MIKISFKQGT LLIEGNVRVP NAVWDERSGN FRALALYYRD IIDYLKNSKI PFKDEVLDLL
PCPDLAAAYE ASGKKLKLRD YQAEALVTWG ENNRWGALVL PTGSGKTLVG IRAIAGCNSP
ALVVVPTLDL LEQWKKQLEE AFTMEIGKLG GGEKKILPIT VSTYDSAYIH AETLGNRFGL
LVFDEVHHLP AAGYRSIAEF SAAPYRLGLT ATYEREDELH LELNRLVGGK VYEKHVSELA
GSHLAPYRIK RIAAALTDEE RKEYNKCYSV YTDYLRKTGI VLRGPRDFQK LVMRSGRDPE
ARKALLARNA ARELAFNTES KIEKLKEILN THREDRIFIF TEHNRLVHRI SREFLIPAIT
YRTPAKERNS ILEKFKEGKY RAVVTSKVLD EGIDVPEANI GIIASGTGSK LAYIQRLGRI
LRKKEGKEAI LYEIITEETT EAGTARRRKK AVSTRKDFGK SAQKNQMKRI SGKESQMKKE
KSSGGGSSAH V
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