Gene Mbar_A2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2627 
Symbol 
ID3625645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3323605 
End bp3324672 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content46% 
IMG OID637701484 
Producthypothetical protein 
Protein accessionYP_306115 
Protein GI73670100 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0802533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.461146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAG GCCGGAACGA AGGTAAATCA GGGAAAAAAA GTGAGAACGA TGTCCACAGA 
AGTCTGCTAT CTCCCCCACC TATGGTATTA AAAGTAGGCC GCTACGTCCC AACGCTTATC
CTTATAGGGC TGGCTGTTAA CCTTATTCTT CCACAACTTG CTTCGGTTGA AGCATCTGCG
CATGTTATCG AGACAATGAT TCCATGGGCT GTGCTACTGG CTGCCCTTGG CCAGGGTGTC
AGTTACCTGG GAGCGGGTTA CCTTATAAAT TCTATCGCAG CAAGAGTAAA CCAGACTATC
CCGATATTAA AAGGAGCTAT AATAACGCTC GCAGCTTCAA GTATAGGCAT GCTGGCAGGA
GGTCCTTTCG GGAATGCTGC AGCGACATAT CGATGGGTAC GGAAATATGG CATTAGTGCC
GAAGGTGCAG GGCTTGCGGG CACCCTGCCC AATATTTTCA ACAATATGAT CTTGACAGTG
CTGGCTATAT CCGGAATTCT TCATCTTCTG TTTACTCACA AACTTTCTTC GGTGCAGTTT
TTTGCTTTTA TTCTAATCCT CACCTTACTT GGCCTGGGCT TTGCAGCAGT ACACTGGGGC
TTAAAAAACA GAAAAGCTTT CACACTTATT GTTGTCAGGA TAGCGGCTTA CTTTGCCCGG
CTCTTGCATA AATCCTACAA ACCTGCTCCA ACCAAAGCTT CAGTAAGCCG GATTTTTACA
GCTCTTGATA CTTTAAGCAA CGGAGGTTGG CAACGCCCGC TTCTTGGGTC TGTGATTTTT
ACGAGTTTTG ATATGCTGAC CCTTTATTTC TTCTTCATAG CCGCAGGGTT TCCTGTAGGG
TTTGAGGTCC TGGTCGTTGG ATATGGGCTC CCTATTCTCT TAGGAAAAAT AGCTTTTCTC
TTGCCAGGCG GAATAGGCGT TGTGGAGAGT TCGATGGCTG CTCTCTATAC AGGCCTGGGA
GTGCCTGGCT CAATTGCTGT TGTTGTTGTA CTCAGCTACC GGGTATTTTC TTTCTGGATT
CCAACAATAA TAGGGTTTCC ACTAGCGTTT TATCTGCAGA GAACGTGA
 
Protein sequence
MSIGRNEGKS GKKSENDVHR SLLSPPPMVL KVGRYVPTLI LIGLAVNLIL PQLASVEASA 
HVIETMIPWA VLLAALGQGV SYLGAGYLIN SIAARVNQTI PILKGAIITL AASSIGMLAG
GPFGNAAATY RWVRKYGISA EGAGLAGTLP NIFNNMILTV LAISGILHLL FTHKLSSVQF
FAFILILTLL GLGFAAVHWG LKNRKAFTLI VVRIAAYFAR LLHKSYKPAP TKASVSRIFT
ALDTLSNGGW QRPLLGSVIF TSFDMLTLYF FFIAAGFPVG FEVLVVGYGL PILLGKIAFL
LPGGIGVVES SMAALYTGLG VPGSIAVVVV LSYRVFSFWI PTIIGFPLAF YLQRT