Gene Mbar_A2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2624 
Symbol 
ID3625737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3321011 
End bp3321361 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content47% 
IMG OID637701481 
Producthypothetical protein 
Protein accessionYP_306112 
Protein GI73670097 
COG category[S] Function unknown 
COG ID[COG4831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000171907 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.249257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAC AGGAATGCAA TTTATCGTTA GATGAACTTC TGAAGTTTGA TGGGGTAATG 
GCAGCCGGGA TTTTCAGTCC CGAAGGAAAG CTTGTGGAGT ATAAGTCCAG GGATGAAATG
CCAAAAGAAA TGGCTGAGAT GACCGCCAAG TTTTGCGGAG CCGTGAACCT GATGTTCGAT
GCTCTGGCCA GTGCTTACAC GCAACTCTAC AAGATGAACT GGGTACCTCA GCAAAACTGG
ATGTACAGCG GCGGCGACTG GACTGTTATG ATCTCGGGAA CGAGAGGGGT TTTTGTTGAG
AAGTCAAAGG CAGATTTAAA GAAGCTCTTT ACGGCCCTGG GAATGTGTTA A
 
Protein sequence
MIAQECNLSL DELLKFDGVM AAGIFSPEGK LVEYKSRDEM PKEMAEMTAK FCGAVNLMFD 
ALASAYTQLY KMNWVPQQNW MYSGGDWTVM ISGTRGVFVE KSKADLKKLF TALGMC