Gene Mbar_A2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2620 
Symbol 
ID3625733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3313894 
End bp3314613 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID637701478 
Producthypothetical protein 
Protein accessionYP_306109 
Protein GI73670094 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00161745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.443629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCAT CTTTTAAAAT CGGAAACATA ATGGACATAC CTATCAAACT GGATACATCT 
TTCCTTCTGG CACTTCCGAT ATCTGCATAT TTTTTCGCGA TCAATTCACA GCCATACGGT
TTTGCGGGAG TTGAGCCAAT TATAGTTAAA TATGCTCTTT CTACTCTTTC TGCTATCTTC
CTTTTTGTCT CAGTACTTTT ACATGAACTT TCACACTCTT ATCTTGCAAA GCGTTATGGG
GCCAATATTC ATAGCATCAC TCTTCTCCTG TTTGGAGGTG TAGCCTCTAT GGAAATCCCA
CAGAAACCCG GACAAGAAGC AAAAATAGCT TTTGCAGGGC CTTTAATGAG CCTCGTAATA
GGTCTTATCT GCCTGTTCAC ATACAATTAC GTAATATCCT CTAACTCTGC GCTTTCTCAA
AACCCTATAT ATCTTATTGT CTGGGTCATT GGATCAATGA ACTTAGTGCT TGGGATCTTT
AATTTACTGC CTGCCTTTCC TATGGATGGA GGCAGGATAC TCCGTTCAGT TTTTGCCAGG
AAAATGTCGT ATGTAAAGGC TACTCATAGT GCAGCTTCCA TCGGAAAGTT TTTTGCTGTT
CTCATGGCGA TTTATGGATT TTACGTAGGT GATATCTGGT TTACCCTAAT TGCTCTCTAT
ATTTATGGTA GCGCATCTAA TGAGGATCGA TTTTACTCAG AATTAGATAG ATCTGTATGA
 
Protein sequence
MQSSFKIGNI MDIPIKLDTS FLLALPISAY FFAINSQPYG FAGVEPIIVK YALSTLSAIF 
LFVSVLLHEL SHSYLAKRYG ANIHSITLLL FGGVASMEIP QKPGQEAKIA FAGPLMSLVI
GLICLFTYNY VISSNSALSQ NPIYLIVWVI GSMNLVLGIF NLLPAFPMDG GRILRSVFAR
KMSYVKATHS AASIGKFFAV LMAIYGFYVG DIWFTLIALY IYGSASNEDR FYSELDRSV