Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2620 |
Symbol | |
ID | 3625733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3313894 |
End bp | 3314613 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701478 |
Product | hypothetical protein |
Protein accession | YP_306109 |
Protein GI | 73670094 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00161745 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.443629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCAT CTTTTAAAAT CGGAAACATA ATGGACATAC CTATCAAACT GGATACATCT TTCCTTCTGG CACTTCCGAT ATCTGCATAT TTTTTCGCGA TCAATTCACA GCCATACGGT TTTGCGGGAG TTGAGCCAAT TATAGTTAAA TATGCTCTTT CTACTCTTTC TGCTATCTTC CTTTTTGTCT CAGTACTTTT ACATGAACTT TCACACTCTT ATCTTGCAAA GCGTTATGGG GCCAATATTC ATAGCATCAC TCTTCTCCTG TTTGGAGGTG TAGCCTCTAT GGAAATCCCA CAGAAACCCG GACAAGAAGC AAAAATAGCT TTTGCAGGGC CTTTAATGAG CCTCGTAATA GGTCTTATCT GCCTGTTCAC ATACAATTAC GTAATATCCT CTAACTCTGC GCTTTCTCAA AACCCTATAT ATCTTATTGT CTGGGTCATT GGATCAATGA ACTTAGTGCT TGGGATCTTT AATTTACTGC CTGCCTTTCC TATGGATGGA GGCAGGATAC TCCGTTCAGT TTTTGCCAGG AAAATGTCGT ATGTAAAGGC TACTCATAGT GCAGCTTCCA TCGGAAAGTT TTTTGCTGTT CTCATGGCGA TTTATGGATT TTACGTAGGT GATATCTGGT TTACCCTAAT TGCTCTCTAT ATTTATGGTA GCGCATCTAA TGAGGATCGA TTTTACTCAG AATTAGATAG ATCTGTATGA
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Protein sequence | MQSSFKIGNI MDIPIKLDTS FLLALPISAY FFAINSQPYG FAGVEPIIVK YALSTLSAIF LFVSVLLHEL SHSYLAKRYG ANIHSITLLL FGGVASMEIP QKPGQEAKIA FAGPLMSLVI GLICLFTYNY VISSNSALSQ NPIYLIVWVI GSMNLVLGIF NLLPAFPMDG GRILRSVFAR KMSYVKATHS AASIGKFFAV LMAIYGFYVG DIWFTLIALY IYGSASNEDR FYSELDRSV
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