Gene Mbar_A2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2617 
Symbol 
ID3625730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3311304 
End bp3311642 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content45% 
IMG OID637701475 
Productbranched chain amino acid transport protein AzlD 
Protein accessionYP_306106 
Protein GI73670091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1687] Predicted branched-chain amino acid permeases (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.580154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACG CTCTTCAAAT GCTCATAACC ATTACTGTCA TAGCGCTTGC AACCTTTGCA 
ACCAGAGCTC TTCCGTTTCT GTTTTTTGGT TCAAGGGAAC CCCCTGCAAT GCTTGCGGTT
ATTGAAAAAA ACCTGCCTCC TATGATTCTC CTGCTACTTG TTATCTACTG CCTGAAAGAC
GTTCAATGGC TTACAGCTCC TTACGGGATT CCGGAATTGT TTACCATAGG TGTCGTTGCC
GGGCTTCACT TCTGGAAAAG AAATGCCATG CTCAGCATCT TTACAGGAAC GGCGCTTTAT
ATGGTACTCG TGCAGTTCAA CGTTTTTTCA TTTCTCTGA
 
Protein sequence
MLDALQMLIT ITVIALATFA TRALPFLFFG SREPPAMLAV IEKNLPPMIL LLLVIYCLKD 
VQWLTAPYGI PELFTIGVVA GLHFWKRNAM LSIFTGTALY MVLVQFNVFS FL