Gene Mbar_A2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2606 
Symbol 
ID3626790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3301110 
End bp3301688 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID637701465 
Producthypothetical protein 
Protein accessionYP_306096 
Protein GI73670081 
COG category[S] Function unknown 
COG ID[COG4739] Uncharacterized protein containing a ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0714657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.552575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC CCGGACAACT CCAATTAGCT GGCATGATTC TCAATCCTGA ATCCGAAGTA 
CTTGAAACAC TTGCAAAGAA TGTACTTCTG GCTGCACGGA CTGCCCCGAA AGCCAAAGGT
ATAGACGATA TAGTGACTGC CCTTGTCGAG AAACCTGATA TCGAAGTGCT TGCCTCGAAA
ATGGAAAAAC TGGCGGATGA AAAAGGCGCA GGCTTTGCTT TTCTAAAAAG GGATGCTGCA
AATCTTCGAA ATGCAGGGGC TGCTGTCCTC ATTGGTGTTA AAACCAGCGG GGCTGCAGGC
CTGGACTGTG GAGCCTGCGG TTTTGAAACC TGTGCTGAGA TGCTGAACCG GCAAAAGGTA
GAAGGAGATT TCAGGGGTCC TAATTGCATG CTCAAGTATG TGGACCTGGG AATAGCTATA
GGCGCAGCCG TTGCAAAAGC TAAGGATTTC TGCATTGACA ATAGAGTGAT GTACTCAATT
GGTGCAGCAG CTAGAGTTTC AGGCTTGCTG GATGCAGATG TTGTTTTTGG AATTCCGCTG
AGCGTAACCG GGAAAAATAT CTTTTTTGAT AGAAAATAA
 
Protein sequence
MLKPGQLQLA GMILNPESEV LETLAKNVLL AARTAPKAKG IDDIVTALVE KPDIEVLASK 
MEKLADEKGA GFAFLKRDAA NLRNAGAAVL IGVKTSGAAG LDCGACGFET CAEMLNRQKV
EGDFRGPNCM LKYVDLGIAI GAAVAKAKDF CIDNRVMYSI GAAARVSGLL DADVVFGIPL
SVTGKNIFFD RK